Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yihQ

Identifier: 30064833

GI number: 30064833

Start: 3691298

End: 3693334

Strand: Direct

Name: yihQ

Synonym: S3796

Alternate gene names: 30064833

Gene position: 3691298-3693334 (Clockwise)

Preceding gene: 30064832

Following gene: 30064834

Centisome position: 80.26

GC content: 53.22

Gene sequence:

>2037_bases
ATGGATACGCCACGTCCACAGTTATTAGATTTTCAATTTCATCAGAATAACGACAGTTTTACCCTACATTTTCAACAACG
TCTTATTTTAACCCATAACAAAGATAATCCTTGTTTATGGATTGGCTCAGGTATAGCGGATATCGATATGTTCCGCGGTA
ATTTCAGCATTAAAGATAAACTACAGGAGAAAATTGCGCTTACCGACGCCATCGTCAGCCAGTCACCGGATGGTTGGTTA
ATTCATTTCAGCCGTGGTTCTGACATTAGCGCCACGCTGAATATCTCTGCCGACGATCAGGGCCGTTTATTGCTGGAACT
ACAAAACGACAACCTTAACCACAACCGTATCTGGCTGCGCCTTGCCGCTCAACCAGAGGACCATATCTACGGCTGCGGCG
AACAGTTTTCCTACTTCGATCTGCGCGGCAAACCGTTCCCGCTATGGACCAGTGAACAAGGCGTTGGTCGCAACAAACAA
ACCTATGTCACCTGGCAGGCCGACTGCAAAGAAAATGCGGGCGGCGACTATTACTGGACTTTCTTCCCACAGCCTACGTT
TGTCAGCACGCAGAAGTATTACTGCCATGTTGATAACAGTTGCTACATGAACTTCGACTTTAGCGCCCCGGAATACCATG
AACTGGCGCTGTGGGAAGACAAAGCTACGCTACGTTTTGAATGTGCTGACACATACATCTCCCTGCTGGAAAAATTAACT
GCCCTGCTGGGACGCCAGCCAGAACTGCCCGACTGGATTTATGACGGGGTAACGCTCGGCATTCAGGGCGGGACGGAAGT
GTGCCAGAAGAAACTGGACACCATGCGTAACGCGGGCGTGAAGGTTAACGGCATCTGGGCGCAGGACTGGTCTGGGATCC
GTATAACCTCTTTTGGCAAGCGCGTGATGTGGAACTGGAAGTGGAACAGCGAAAACTACCCGCAACTGGATTCACGCATT
AAGCAGTGGTATCAGGAGGGCGTGCAGTTCCTGGCCTATATCAACCCGTATGTTGCCAGCGATAAAGATCTCTGCGAAGA
AGCGGCACAACACGGCTATCTAGCAAAAGATGCCTCTGGCGGTGACTATCTGGTGGAGTTTGGCGAGTTTTACGGCGGCG
TTGTCGATCTCACTAATCCAGAAGCCTACGCCTGGTTCAAGGAAGTGATCAAAAAGAACATGATTGAACTCGGCTGCGGC
GGCTGGATGGCTGACTTCGGCGAGTATCTGCCCACCGACACGTACCTGCATAACGGCGTCAGTGCCGAAATTATGCATAA
CGCCTGGCCTGCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTCTTCTTTA
TGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAGAACGTGGACTGGAGTCTCGAC
GATGGCCTGGCGTCCGTAGTCCCGGCGGCGCTGTCGCTGGCAATGACCGGACATGGTCTGCATCACAGCGACATTGGCGG
TTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTGGTGCGATTTCAGCGCCTTCACGCCGATGA
TGCGCACCCACGAAGGTAACCGTCCTGGCGACAACTGGCAGTTTGACGGCGATGCGGAAACTATCGCCCATTTTGCCCGT
ATGACTACCGTTTTCACCACCCTGAAACCTTATCTGAAAGAGGCCGTCGCGCTGAATGCGAAGTCCGGTCTGCCGGTCAT
GCGCCCGCTGTTCCTGCATTACGAAGACGATGCACATACCTATTCCCTGAAATATCAGTACCTGTTAGGCCGCGACATTC
TGGTCGCTCCGGTACACGAAGAAGGTCGCAGCGACTGGACGCTCTATCTGCCGGAGGATAACTGGGTACATGCCTGGACG
GGTGAAGCGTTCCGGGGCGGGGAAGTTACCGTTAATGCGCCCATCGGCAAGCCGCCGGTCTTTTATCGCGCCGATAGCGA
ATGGGCGGCACTGTTCGCGTCGTTAAACAGCATCTAA

Upstream 100 bases:

>100_bases
CTGTAAAGTTTTTATATATCAGTTTTATGAGAATCATTTTACATAAGCCTGTAATAACAGGAAGGCAACAATCTCGTTCT
CAACTCTATGGAGATTAGTT

Downstream 100 bases:

>100_bases
TCACATCCGCCCGTGGGGAAACTCATGGGCAAAGGGAGAACATCGATGAGTCACATCACAACGGAAGATCCAGCAACTTT
ACGCCTGCCCTTTAAAGAGA

Product: alpha-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHNKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL
IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ
TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT
ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRITSFGKRVMWNWKWNSENYPQLDSRI
KQWYQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG
GWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD
DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR
MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT
GEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLNSI

Sequences:

>Translated_678_residues
MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHNKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL
IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ
TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT
ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRITSFGKRVMWNWKWNSENYPQLDSRI
KQWYQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG
GWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD
DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR
MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT
GEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLNSI
>Mature_678_residues
MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHNKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL
IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ
TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT
ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRITSFGKRVMWNWKWNSENYPQLDSRI
KQWYQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG
GWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD
DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR
MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT
GEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLNSI

Specific function: Exhibits hydrolysis activity against alpha-glucosyl fluoride, although natural substrates, such as alpha-glucobioses are scarcely hydrolyzed [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI153791946, Length=349, Percent_Identity=24.6418338108883, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI88900491, Length=351, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI38202257, Length=351, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI66346737, Length=389, Percent_Identity=26.2210796915167, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI119393895, Length=371, Percent_Identity=23.1805929919137, Blast_Score=87, Evalue=7e-17,
Organism=Homo sapiens, GI119393893, Length=371, Percent_Identity=23.1805929919137, Blast_Score=87, Evalue=7e-17,
Organism=Homo sapiens, GI119393891, Length=371, Percent_Identity=23.1805929919137, Blast_Score=87, Evalue=7e-17,
Organism=Homo sapiens, GI221316699, Length=242, Percent_Identity=27.6859504132231, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI310115361, Length=236, Percent_Identity=28.8135593220339, Blast_Score=78, Evalue=3e-14,
Organism=Escherichia coli, GI2367323, Length=678, Percent_Identity=99.2625368731563, Blast_Score=1410, Evalue=0.0,
Organism=Escherichia coli, GI2367256, Length=550, Percent_Identity=24.5454545454545, Blast_Score=175, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17560798, Length=380, Percent_Identity=22.6315789473684, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17560800, Length=380, Percent_Identity=22.6315789473684, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71991189, Length=366, Percent_Identity=24.5901639344262, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32563849, Length=231, Percent_Identity=30.7359307359307, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71985706, Length=237, Percent_Identity=29.1139240506329, Blast_Score=81, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319706, Length=381, Percent_Identity=22.0472440944882, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24650054, Length=345, Percent_Identity=25.7971014492754, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24643749, Length=348, Percent_Identity=23.5632183908046, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24643753, Length=348, Percent_Identity=23.5632183908046, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24643751, Length=348, Percent_Identity=23.5632183908046, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24643746, Length=348, Percent_Identity=23.5632183908046, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21357605, Length=348, Percent_Identity=23.5632183908046, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28571440, Length=379, Percent_Identity=20.5804749340369, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571438, Length=380, Percent_Identity=21.5789473684211, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: =3.2.1.20 [H]

Molecular weight: Translated: 77305; Mature: 77305

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHNKDNPCLWIGSGIADIDMFRGNFSIKDK
CCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHH
LQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLR
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEE
LAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWT
EECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE
FFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT
ECCCCCEEECCEEEEEECCEEEEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHH
ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRITSFGK
HHHCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCC
RVMWNWKWNSENYPQLDSRIKQWYQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHCCCEEECCCC
GDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGV
CHHEEEEHHHCCCEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHCCC
SAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD
CHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC
DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGN
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCC
RPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHT
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCEE
YSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPV
EEEEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCE
FYRADSEWAALFASLNSI
EEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHNKDNPCLWIGSGIADIDMFRGNFSIKDK
CCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHH
LQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLR
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEE
LAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWT
EECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE
FFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT
ECCCCCEEECCEEEEEECCEEEEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHH
ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRITSFGK
HHHCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCC
RVMWNWKWNSENYPQLDSRIKQWYQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHCCCEEECCCC
GDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGV
CHHEEEEHHHCCCEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHCCC
SAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD
CHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC
DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGN
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCC
RPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHT
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCEE
YSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPV
EEEEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCE
FYRADSEWAALFASLNSI
EEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]