| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yjaB
Identifier: 30064711
GI number: 30064711
Start: 3540544
End: 3540987
Strand: Direct
Name: yjaB
Synonym: S3652
Alternate gene names: 30064711
Gene position: 3540544-3540987 (Clockwise)
Preceding gene: 161486415
Following gene: 30064712
Centisome position: 76.98
GC content: 53.6
Gene sequence:
>444_bases ATGGTTATTAGTATTCGCCGCTCACGGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGGTGTCGATCTGTCGATGCCAC CCACGATTTTTTATCAGCAGAGTATCGGGCCGAGCTGGAAGAGCTGGTGCGTTCCTTTCTGCCGGAAGCACCGTTGTGGG TCGCGGTTAATGAACGGGAGCAGCCGGTTGGGTTTATGTTGTTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCT GATGTGTGCGGCTGCGGCGTGGGTCGGATGCTGGTGGAGCATGCGCTCTCGATGGCACCGGAACTGACAACCAACGTTAA TGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTGGGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGG GGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAA
Upstream 100 bases:
>100_bases TAACCAGAAAATTTGCCAATGTCGAGCCTGCATGTTGAAGGTGAGAAAGTTTCAAGGAAAAGGCTACGTTAGAATATAAG AATGACGAAAAGGAGAGAAA
Downstream 100 bases:
>100_bases GCCGCCTCTGCCGTGCCTGCCCAAGCTGGAGAAGACGCGCCAGCGTCGCACCCGGCATTTTTTTCACCAACGCAAAAAGG CCATCCTGACGGATAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNEREQPVGFMLLSGQHMDALFIDP DVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGE
Sequences:
>Translated_147_residues MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNEREQPVGFMLLSGQHMDALFIDP DVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGE >Mature_147_residues MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNEREQPVGFMLLSGQHMDALFIDP DVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790442, Length=146, Percent_Identity=96.5753424657534, Blast_Score=293, Evalue=3e-81, Organism=Escherichia coli, GI1789972, Length=143, Percent_Identity=26.5734265734266, Blast_Score=63, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 16482; Mature: 16482
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNERE CEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC QPVGFMLLSGQHMDALFIDPDVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKV CCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC GFKVTGRSEVDDLGKPYPLLNLAYVGE CEEEECCCCHHHCCCCCCCEEEEEECC >Mature Secondary Structure MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNERE CEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC QPVGFMLLSGQHMDALFIDPDVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKV CCEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC GFKVTGRSEVDDLGKPYPLLNLAYVGE CEEEECCCCHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2412207; 8265357; 9278503; 1709493 [H]