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The map label for this gene is hyfJ [H]

Identifier: 30063866

GI number: 30063866

Start: 2577637

End: 2578113

Strand: Direct

Name: hyfJ [H]

Synonym: S2683

Alternate gene names: 30063866

Gene position: 2577637-2578113 (Clockwise)

Preceding gene: 30063865

Following gene: 30063868

Centisome position: 56.04

GC content: 51.99

Gene sequence:

>477_bases
ATGCCGACGATCCACGTCTCAATAGTATCGTTCAGCAACTCTTTCGCGTACTCCGGGGGTTACATGACTGAAGAGTGCGG
GGAAATTGTTTTCTGGACGCTGCGAAAAAAGTTTGTCGCCAGTAGCGACGAGATGCCGGAACACAGCTCTCAGGTAATGT
ATTACTCGCTGGCTATCGGTCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATAC
GAAGATTGGCTTGCACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTAT
TGACGCCAGCCACACCGCCCTGTTGACCCGGGCATTCGCGCCACTGGCAGATGACGCGACGTCTGTGTGGCAAGCGCGTA
GCATTCAATTCATTCATCTGTTGGATGAAATTGTGCTGGAACCGGCTATCTATCTGATGGCCAGAAAAATTGCGTGA

Upstream 100 bases:

>100_bases
CGGCTGGCGGGCTATCGTCAGGGGCGAGAAATTTGCGATCGGCTCCTGCGCCATTTAAGCGACGATCCTACAGGAAATCG
GGTTAACACCTGGTTGCGCG

Downstream 100 bases:

>100_bases
GAAGGATTTCTCATTAATAAGGACTGTTGATGGCTATGTCAGACGAAGCGATGTTTGCCCCGCCGCAAGGAATAACAATT
GAAGCGGTAAACGGAATGCT

Product: putative protein processing element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEY
EDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA

Sequences:

>Translated_158_residues
MPTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEY
EDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA
>Mature_157_residues
PTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYE
DWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli hycH [H]

Homologues:

Organism=Escherichia coli, GI87082116, Length=137, Percent_Identity=99.2700729927007, Blast_Score=283, Evalue=5e-78,
Organism=Escherichia coli, GI1789073, Length=131, Percent_Identity=47.3282442748092, Blast_Score=120, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010005
- ProDom:   PD021295 [H]

Pfam domain/function: PF07450 HycH [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 17809; Mature: 17678

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIG
CCEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
HHVGVIDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHC
PLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIG
CEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
HHVGVIDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHC
PLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]