| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063834
Identifier: 30063834
GI number: 30063834
Start: 2533861
End: 2534403
Strand: Direct
Name: 30063834
Synonym: S2645
Alternate gene names: NA
Gene position: 2533861-2534403 (Clockwise)
Preceding gene: 30063833
Following gene: 30063835
Centisome position: 55.09
GC content: 48.8
Gene sequence:
>543_bases ATGGACGCATTTGAGGTACTGGCAAATAAAGGCGCTGAACTGGTAGCACAGCGTGATAAAACCGCCAACGAAGGGGAACG CGCACTGCTAAATAAACAGATTAAAGCGATCCGTATGGCCCAGTTTAAATTAATCAGTAATGAAGTTATCGAAACAATTA AACCGCAGATCCCACAAATCGTTGCTGACGCTATTAAAGCCGCCGGACTGGAGAAACGCATTGCCGGGCTAAAAACGAAC GCAGAGAAAATGGAGATGTACAAACAGAGCGGTGCTCCGAATCCCGATGAGTACTTCTCACCGGATGTTGAGTTTATGGC GCAGGTTGAGGAACGTCTGGGTAGCTGTCTCACCGAGGAACAGCGTCGCTATTTTGATGGAGTGGATAGTTCGGCAGGTA TTGACCTGAACTCGTATTTCGGTCGTGAAATTGAGCATTTTGATGCCGCCCCGTCTATGCCGGAGCCAGAACCAGAAATG GCCACCGATCCTGAAGCTGAGCAACGGAAACGCGTATTCAATGCGATAGGGATTCGGTACTGA
Upstream 100 bases:
>100_bases ATGGAAGGCACTGCAAAGCGGCGACTCATTTGCGAATTAAGTCGTCGTTTTGGCGTGTCAATAAGCGCTTTTAAATAATC GAAAAAAGGGGGGAAAGATA
Downstream 100 bases:
>100_bases TCGGATAAAAGAAAGCCGGGAATTACCCCGGCTGACTTAACAATGTGACCAATGAACAAATCGGACAAGACAAACAGGAT AAGCAGTCTCGAAACAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKLISNEVIETIKPQIPQIVADAIKAAGLEKRIAGLKTN AEKMEMYKQSGAPNPDEYFSPDVEFMAQVEERLGSCLTEEQRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEM ATDPEAEQRKRVFNAIGIRY
Sequences:
>Translated_180_residues MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKLISNEVIETIKPQIPQIVADAIKAAGLEKRIAGLKTN AEKMEMYKQSGAPNPDEYFSPDVEFMAQVEERLGSCLTEEQRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEM ATDPEAEQRKRVFNAIGIRY >Mature_180_residues MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKLISNEVIETIKPQIPQIVADAIKAAGLEKRIAGLKTN AEKMEMYKQSGAPNPDEYFSPDVEFMAQVEERLGSCLTEEQRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEM ATDPEAEQRKRVFNAIGIRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20187; Mature: 20187
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKLISNEVIETIKPQIPQI CCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VADAIKAAGLEKRIAGLKTNAEKMEMYKQSGAPNPDEYFSPDVEFMAQVEERLGSCLTEE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH QRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEMATDPEAEQRKRVFNAIGIRY HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKLISNEVIETIKPQIPQI CCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VADAIKAAGLEKRIAGLKTNAEKMEMYKQSGAPNPDEYFSPDVEFMAQVEERLGSCLTEE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH QRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEMATDPEAEQRKRVFNAIGIRY HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA