| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063832
Identifier: 30063832
GI number: 30063832
Start: 2533162
End: 2533557
Strand: Direct
Name: 30063832
Synonym: S2643
Alternate gene names: NA
Gene position: 2533162-2533557 (Clockwise)
Preceding gene: 30063831
Following gene: 30063833
Centisome position: 55.08
GC content: 41.92
Gene sequence:
>396_bases ATGACCAATATCGAAAGATTAGAACGCTGTGCCGATATTATGCGACGCAGATGGATTTATGACCCTGAAGCGGGTTTATT GTTTAGCCGTGAAACAAAAGACGTTATCAAAGGCAGCATGACCAATAAAGGGCATTTGGTTGTAACGGTACATGAAGGTA AATTCAAAGTGACACTCACCTATCAGAAAGCCTGCTATGTATACACATACGGCGCTTATGACGAGACATTATATGAAGTG CACCACGTTAATTTGAACAAACAGGATAACCGCATCAAGAATATTCGCCTGATGCCGAAAGAAAAGCACCGCCGGATACA TAAAAACGTCCGCAAACTTATTCGGCTGGGCCACACACAATGGCTTCAACCGCAATTAATTGAACAATCACTATAA
Upstream 100 bases:
>100_bases CCACGCGGTACTCGCCAATTATTCTGGGAGCACGAATGCAAAGAATGGTTGTACAGAACAGAACGATAATAATCACGCAT CACATTTTGAGGTAAACATC
Downstream 100 bases:
>100_bases ACACAGGAGTAAATACCATGCATTCATTAGACAGTTATTTTCAGCGCACGACAGCCCCTAAATCAGCCGCCCAGGAACGC CGTGAGGAATTCCATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKGHLVVTVHEGKFKVTLTYQKACYVYTYGAYDETLYEV HHVNLNKQDNRIKNIRLMPKEKHRRIHKNVRKLIRLGHTQWLQPQLIEQSL
Sequences:
>Translated_131_residues MTNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKGHLVVTVHEGKFKVTLTYQKACYVYTYGAYDETLYEV HHVNLNKQDNRIKNIRLMPKEKHRRIHKNVRKLIRLGHTQWLQPQLIEQSL >Mature_130_residues TNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKGHLVVTVHEGKFKVTLTYQKACYVYTYGAYDETLYEVH HVNLNKQDNRIKNIRLMPKEKHRRIHKNVRKLIRLGHTQWLQPQLIEQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15707; Mature: 15575
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKGHLVVTVHEGKFKVTLT CCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEEEE YQKACYVYTYGAYDETLYEVHHVNLNKQDNRIKNIRLMPKEKHRRIHKNVRKLIRLGHTQ EECEEEEEEECCCHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC WLQPQLIEQSL CCCHHHHHCCC >Mature Secondary Structure TNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKGHLVVTVHEGKFKVTLT CCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCCCCCCEEEEEECCEEEEEEE YQKACYVYTYGAYDETLYEVHHVNLNKQDNRIKNIRLMPKEKHRRIHKNVRKLIRLGHTQ EECEEEEEEECCCHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC WLQPQLIEQSL CCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA