| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is cysP
Identifier: 30063818
GI number: 30063818
Start: 2517949
End: 2518965
Strand: Reverse
Name: cysP
Synonym: S2626
Alternate gene names: 30063818
Gene position: 2518965-2517949 (Counterclockwise)
Preceding gene: 30063819
Following gene: 30063817
Centisome position: 54.77
GC content: 53.1
Gene sequence:
>1017_bases ATGGCCGTTAACTTACTGAAAAAGAACTCACTCGCGCTGGTCGCTTCTCTGCTGCTGGCGGGCCATGTACAGGCAACGGA ACTGCTGAACAGTTCTTATGACGTCTCCCGCGAGCTGTTTGCCGCCCTGAATCCGCCGTTTGAACAGCAATGGGCAAAAG ATAACGGCGGCGACAAACTGACGATAAAACAATCTCATGCCGGGTCATCAAAACAGGCGCTGGCGATTTTGCAGGGCTTA AAAGCAGACGTTGTCACTTATAACCAGGTGACCGACGTACAAATCCTGCACGACAAAGGCAAGCTGATCCCGGCTGACTG GCAGTCGCGCCTGCCGAATAATAGCTCGCCGTTCTACTCCACCATGGGCTTCCTGGTGCGTAAGGGCAACCCGAAGAATA TCCACGACTGGAACGACCTGGTGCGCTCCGACGTGAAGCTGATTTTCCCGAACCCGAAAACGTCGGGTAACGCGCGTTAT ACCTATCTGGCGGCATGGGGCGCAGCGGATAAAGCTGACGGTGGCGATAAAGCCAAAACCGAACAGTTTATGACCCAGTT CCTGAAAAACGTTGAAGTGTTCGATACCGGCGGTCGTGGCGCAACCACCACTTTTGCCGAGCGTGGCTTGGGCGATGTGC TGATTAGCTTTGAATCGGAAGTGAACAACATCCGTAAACAGTATGAAGCACAGGGCTTTGAAGTGGTGATCCCGAAAACC AATATTCTGGCGGAATTCCCGGTGGCGTGGGTCGATAAAAATGTGCAGGCCAACGGTACGGAAAAAGCCGCAAAAGCCTA CCTGAACTGGCTCTACAGCCCACAGGCGCAGACCATCATCACCGACTATTACTACCGTGTGAATAACCCGGAAGTCATGG ACAAACTGAAAGATAAATTCCCGCAGACCGAACTGTTCCGCGTGGAAGACAAATTTGGCTCATGGCCGGAAGTGATGAAA ACCCACTTCACCAGCGGCGGCGAGTTAGACAAGCTGTTAGCGGCGGGGCGTAAGTAA
Upstream 100 bases:
>100_bases ACTTCCAAATCACCAAACGGTATATAAAACCGTTACTCCTTTCACGTCCGTTATAAATATGATGGCTATTAGAAAGTCAT TAAATTTATAAGGGTGCGCA
Downstream 100 bases:
>100_bases TGTTTGCAGTTTCTTCAAGACGCGTGCTGCCGGGCTTTACTTTAAGCCTTGGCACCAGTCTGCTGTTTGTGTGCCTGATA TTGCTGCTGCCGCTCTCTGC
Product: thiosulfate transporter subunit
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGL KADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMK THFTSGGELDKLLAAGRK
Sequences:
>Translated_338_residues MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGL KADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMK THFTSGGELDKLLAAGRK >Mature_337_residues AVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLK ADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYT YLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTN ILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKT HFTSGGELDKLLAAGRK
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. This protein specifically binds thiosulfate and is involved in its transmembrane transport [H]
COG id: COG4150
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1788765, Length=337, Percent_Identity=99.7032640949555, Blast_Score=693, Evalue=0.0, Organism=Escherichia coli, GI1790351, Length=323, Percent_Identity=46.4396284829721, Blast_Score=301, Evalue=4e-83,
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37643; Mature: 37512
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00092 N6_MTASE ; PS00401 PROK_SULFATE_BIND_1 ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL CCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS EEECCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCHHH TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT HHHHHEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT HHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCC NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF CCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHC PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRK CCCCEEEEHHHCCCCHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure AVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL CCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS EEECCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCHHH TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT HHHHHEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT HHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCC NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF CCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHC PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRK CCCCEEEEHHHCCCCHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2188959; 9205837; 9278503; 9298646 [H]