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The map label for this gene is ypdI [H]

Identifier: 30063782

GI number: 30063782

Start: 2475888

End: 2476163

Strand: Direct

Name: ypdI [H]

Synonym: S2580

Alternate gene names: 30063782

Gene position: 2475888-2476163 (Clockwise)

Preceding gene: 30063777

Following gene: 161486455

Centisome position: 53.83

GC content: 38.04

Gene sequence:

>276_bases
ATGAAAGTAAACTTAATACTTTTCAGCTTATTTTTATTGGTCTCTATTATGGCATGCAATGTTTTTGCATTTTCCATTTC
TGGTGGTGTAAGTGAGAGGAGCTATAAAGAGACTGAAAAAACATCAGCGATGACGACCACACACTCTACAAAACTTCAGC
CATCACAGGCGATTTTGTTTAAGATGAGAGAAGATGTGCCACCATTAAACCTCACAGAAGAAATCACGCCTACTTATCCG
ACAAAGGCGAATTATCTTATTCATCCTGTGCGATAG

Upstream 100 bases:

>100_bases
GATGTCATTTATTATATTGATGTAAATATTGATTAATTATATGTAAATACAGCCATAACATCGTATGGTTCTCAGTGAAC
CATTTTCAGGATAACTTTCT

Downstream 100 bases:

>100_bases
CGTCTGTCACATGGCAGGTGAACAATCATGTCTGATGCTGATGTGAACACCTGCCCAAATGAGCCATCCTGACCCACTAT
CGCCTGCCATACCCCACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDVPPLNLTEEITPTYP
TKANYLIHPVR

Sequences:

>Translated_91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDVPPLNLTEEITPTYP
TKANYLIHPVR
>Mature_91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDVPPLNLTEEITPTYP
TKANYLIHPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367134, Length=91, Percent_Identity=93.4065934065934, Blast_Score=175, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10238; Mature: 10238

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILF
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHH
KMREDVPPLNLTEEITPTYPTKANYLIHPVR
HHHCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILF
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHH
KMREDVPPLNLTEEITPTYPTKANYLIHPVR
HHHCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]