Click here to switch to the map view.

The map label for this gene is inaA

Identifier: 30063671

GI number: 30063671

Start: 2345033

End: 2345683

Strand: Reverse

Name: inaA

Synonym: S2452

Alternate gene names: 30063671

Gene position: 2345683-2345033 (Counterclockwise)

Preceding gene: 30063673

Following gene: 30063664

Centisome position: 51.0

GC content: 49.77

Gene sequence:

>651_bases
ATGGCAGTTTCAGCAAAGTACGACGAATTTAATCACTGGTGGGCAACAGAGGGCGACTGGGTTGAAGAGCCTAACTATCG
CCGTAATGGTATGAGCGGGGTGCAATGCGTCGAGCGCAACGGCAAAAAGCTGTATGTAAAGCGCATGACGCATCATCTGT
TTCATTCAGTACGTTATCCGTTCGGCCGACCAACGATTGTCCGTGAGGTTGCGGTAATTAAAGAACTGGAACGGGCCGGT
GTCATCGTGCCGAAGATCGTTTTTGGTGAAGCGGTGAAAATTGAGGGTGAATGGCGCGCGTTGCTGGTGACTGAAGATAT
GGCGGGGTTCATCAGCATTGCTGACTGGTATGCCCGGCATGCAGTATCGCCTTATTCTGACGAAGTACGGCAAGCCATGT
TGAAAGCAGTGGCACTGGCGTTTAAGAAAATGCATAGCGTTAATCGTCAGCATGGCTGTTGCTATGTTCGCCATATCTAT
GTGAAAACAGAAGGTAAGGCAGAAGCTGGTTTTCTTGATCTGGAGAAAAGTCGTCGCCGCTTGCGTCGCGATAAAGCGAT
TAATCATGACTTCCGCCAGCTGGAAAAATATCTGGAGCCGATCCCTAAAGCGGACTGGGAGCAGGTGAAAGCGTATTACT
ACGCCATGTAA

Upstream 100 bases:

>100_bases
GCGGCAAAAGAAATTCATTAATACGACACGTTTCATTAAGATTTTCCTCAGGTAACCACCTATAGTCATTGTCGTTAATA
AAAATGACAGGCGATAGGGT

Downstream 100 bases:

>100_bases
TCGTTGTAGGCCAGATAATACGCGTAAGCGTCGTATCTGGCGCTAGTACCCGATCACAACTCGATTTCAATATCGCCTTT
TGCCCGGCAACAACAGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAG
VIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIY
VKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM

Sequences:

>Translated_216_residues
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAG
VIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIY
VKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>Mature_215_residues
AVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGV
IVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYV
KTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM

Specific function: May be an environmental sensor responsive to several stimuli, including internal pH, proton motive force, temperature, and possibly other unknown factors [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. KdkA/rfaP family [H]

Homologues:

Organism=Escherichia coli, GI1788569, Length=216, Percent_Identity=98.6111111111111, Blast_Score=446, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010440 [H]

Pfam domain/function: PF06293 Kdo [H]

EC number: NA

Molecular weight: Translated: 25324; Mature: 25193

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHCCC
FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARH
CCCCHHHHHHHHHHHHHHCCCEECCEECCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEHHHHHHH
LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHCCC
FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARH
CCCCHHHHHHHHHHHHHHCCCEECCEECCCEEEECCCEEEEEEECHHHHHHHHHHHHHHH
AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEHHHHHHH
LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6087316; 9205837; 9278503; 1537798 [H]