Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yejA

Identifier: 30063620

GI number: 30063620

Start: 2275020

End: 2276834

Strand: Direct

Name: yejA

Synonym: S2393

Alternate gene names: 30063620

Gene position: 2275020-2276834 (Clockwise)

Preceding gene: 30063619

Following gene: 30063621

Centisome position: 49.46

GC content: 50.63

Gene sequence:

>1815_bases
ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTCGGTGCGCAGGCGCAGGCTATCAAGGAAAGCTATAC
CTTTGCCGTGCTGGGCGAACCCCGGTACGCGTTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTG
GGCAGATAACGTTGTCAGCCCTCGGTACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAACCCGGGCGCACGCACC
GAGCAGCTGTACGACACGTTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGTGCACG
CTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCGCGCGCCCGTTTTCATGATGGTTCTCCCATTACTGCCC
GCGATGTAGAGTTTACTTTTCAAAAATTTCTGACCGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTC
AAAGCCATTGCGCCGTTAACCGTGCGCATTGAGTTAGCTAAACCCGGCAAAGAAGATATGTTGAGTCTGTTTTCGCTGCC
GGTATTTCCAGAAAAGTACTGGAAGGATCACAAACTTAGCGACCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACC
ACGTTACGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGCGTGAAAGATTACTGGGCAGCAAACTTACCGGTAAAC
CGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGG
TGCCTTTGATTTGCGTATGGAAAACGACGCTAAAAACTGGGCCACGCGTTATACCGGTAAAAATTTCGATAAAAAATACA
TCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGCTGGCTGGCGTTTAATATCCAACGTGCGGTATTCAGC
GATCGCCGGGTGCGGGAAGCAATCACTCTCGCCTTTGACTTTGAATGGATGAACAAGGCGTTGTTTTACAACGCCTGGAG
TCGCACGAACAGTTATTTTCAAAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCAC
CAATGAAAAAAGATCTACCGCCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCTAAAGGCGATGGCTACGATCGT
GACAACCTGTTAAAAGCCGACAAACTTCTCAACGAAGCGGGCTGGGTGCTGAAGGGTCAGCAACGCGTTAATGCCACAAC
GGGTCAGCCGCTCAGCTTTGAATTATTGCTTCCCGCAAGCAGCAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGC
AACGGCTGGGTATCAATATGGACATTCGCAAGGTGGATAACTCGCAAATCACTAACCGCATGCGCAATCGCGACTATGAC
ATGATGCCGCGACTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTC
CACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCACTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAG
AAAAATTACTGCCGTTGGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTACATGGCG
GAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCAACCCGCTGTACGCCCTGTTTACAGCCTGGGTATCGATACCTGGTG
GTATGACGTTAATAAAGCGGCCAAACTGCCGTCAGCCAGACAACAGGGAGAGTAG

Upstream 100 bases:

>100_bases
GTATACGCCGCAGTGGTAAGGTGTGCTTACGTCCCTTATTATTCATAGTGAAAGCATGCCGGATTGCGGCTAATGATGAG
TAAAAGGAAATCCGTTGCAG

Downstream 100 bases:

>100_bases
ATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACGTTATGGGCTATTATCACTATCAACTTTTTCATCGT
GCAAATTGCGCCTGGCGGTC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART
EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN
RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS
DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR
DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD
MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA
EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE

Sequences:

>Translated_604_residues
MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART
EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN
RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS
DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR
DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD
MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA
EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE
>Mature_604_residues
MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART
EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN
RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFS
DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR
DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD
MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA
EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae hbpA [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=604, Percent_Identity=98.1788079470199, Blast_Score=1222, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69715; Mature: 69715

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA
CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEE
LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN
ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
PRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM
CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH
LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN
HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC
RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK
CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC
NESAQDTRWLAFNIQRAVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA
CCCCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH
RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ
CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC
QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD
CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCH
MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG
HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR
HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH
QQGE
HCCC
>Mature Secondary Structure
MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA
CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEE
LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN
ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
PRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM
CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH
LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSWKMGQNIVYSRVKDYWAANLPVN
HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC
RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK
CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC
NESAQDTRWLAFNIQRAVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA
CCCCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH
RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ
CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC
QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRNRDYD
CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCH
MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG
HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR
HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH
QQGE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]