| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeiU [H]
Identifier: 30063617
GI number: 30063617
Start: 2271510
End: 2272223
Strand: Direct
Name: yeiU [H]
Synonym: S2390
Alternate gene names: 30063617
Gene position: 2271510-2272223 (Clockwise)
Preceding gene: 30063616
Following gene: 30063618
Centisome position: 49.39
GC content: 43.84
Gene sequence:
>714_bases ATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGGCCCCGCGCTGTTTCTTTCCTGGTATATTCCCGTTAA TCATGGATTCTGGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTAT GGCTGGTTGCATTGACTAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGG CTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATGGGTCTGGTCATGCTATTAACTGCAGTGGTATTAAACCA GCTGGGTCAGGCATTAATTCCTGTAAAACGGGCCAGCCCAACATTGACTTTTACCGATATTAACCGCGTCAGCGAACTGC TCTCTGTTCCCACGAAAGATGCCTCACGAGATAGCTTTCCCGGCGATCACGGCATGATGCTGCTTATTTTTTCGGCATTC ATGTGGCGTTATTTCGGCAAAGTTGCAGGCCTTATCGCCCTTATTATTTTTATGGTTTTTGCATTTCCCAGAGTAATGAT TGGCGCACACTGGTTTACTGACATCATTGTCGGTTCGATGACCGTGATATTGATCGGTTTGCCCTGGGTGTTGCTGACGC CATTAAGTGATCGATTAATCACCTTTTTTGACAAATCACTACCAGGAAAAAACAAACATTTCCAAAACAAATAA
Upstream 100 bases:
>100_bases AAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGTTTAGCGACTACCGCGTAAGGTTGCCTGCGTTTTTCA GTAAGATAATTAGAGAAAAT
Downstream 100 bases:
>100_bases CTCACAGTAATTAACATCATCAGGGTTATTTTTATAGTGAGGATAATCCTGATGATGCGCACCGTGCTTTCATCTATCGA ACGCAAAAATCATTCTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFW LKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF MWRYFGKVAGLIALIIFMVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
Sequences:
>Translated_237_residues MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFW LKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF MWRYFGKVAGLIALIIFMVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK >Mature_237_residues MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFW LKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF MWRYFGKVAGLIALIIFMVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI87082062, Length=237, Percent_Identity=98.7341772151899, Blast_Score=469, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 26794; Mature: 26794
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTN CCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEEC NRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASP CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC TLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFMVF CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTN CCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEEC NRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASP CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC TLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFMVF CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]