Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is 30063432

Identifier: 30063432

GI number: 30063432

Start: 2040864

End: 2041709

Strand: Direct

Name: 30063432

Synonym: S2146

Alternate gene names: NA

Gene position: 2040864-2041709 (Clockwise)

Preceding gene: 30063431

Following gene: 30063433

Centisome position: 44.37

GC content: 43.97

Gene sequence:

>846_bases
ATGACATTCGGTCGCTTGTGGGAAAAATTCCTCGCCAGCGCCTATTACAGTGACCTCAGTCCAAGAACACAAAAAGATTA
TCTGCAACATCAAAAAAAGTTGCTTGCCGTATTCGGTAAGGTGCCGGCAGATTCCATAAAACCAGAACACATCCGTCGAT
ACATGGACAAGAGAGGGGAACAGAGTAAAACGCAAGCCAACCATGAAAAAAGCAGTATGTCCCGCGTTTACAGTTGGGGG
TATGAGCGAGGGTACGTGAAGGCTAACCCATGTGCAGGTGTAAGTAAATTCAAGGCCAAAAACCGCGAACGATATGTAAC
CGACAAAGAATACCAGGCAGTATTAAGCGTTGCACCTCTTCCTGTTTTTATCGCAATGGAAATTGCCTATCTGTGTGCAG
CGAGGGTTTCCGATGTGTTATCGCTGAAATGGGAGCAGATTGGAAACGACGGGATCTTTATCCAGCAAGGGAAAACAGGA
AAAAAACAGATAAAAGCATGGAGTCCACGATTACAGGCGGCGATCGAAAAAGCAAAACAGTTACCAACATCCGCCTATGT
AATCAGCAATCAATACGGCAACCGATATATGTACAAAGGCTTTAACGAAATGTGGGTAGAAGCAAGAAATCGCGCAGGCA
AAATTTCAGGTATTTTAACCGACTTCACCTTTCATGATCTGAAGGCGAAAGGAATTTCAGACTATGAAGGAAGCAGTCGG
GATAAGCAACTTTTCTCTGGTCACAAAACCGAGGGGCAAGTGCTAATCTATGACAGGAAGGTTAAAGTTTCACCGACACT
TGATGTCCCGTTACCTGAAAATATTCCAAGAAAATATTCCAAGTAA

Upstream 100 bases:

>100_bases
ACCAACATCCAGAGAATCTGTAACACTAACCGCCATCAAGGATGGTTTAGCTGCTTTATGGAAAAAGTATGAGGAAACTG
TAAATAATCGCGATCGTGCA

Downstream 100 bases:

>100_bases
TTCCAAGTGTGATTTTTGTCACTGACTTAATGATGTATAAGTGATTGAATTTTGGCGGAGAGAGGGGGATTTGAACCCCC
GGTGGAGTTGCCCCCACTCC

Product: putative integrase for prophage CP-933U

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase; Phage-Related Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase Protein; Site-Specific Recombinase; Prophage; Integrase/Recombinase; Integrase Prophage; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWG
YERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTG
KKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSR
DKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK

Sequences:

>Translated_281_residues
MTFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWG
YERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTG
KKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSR
DKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK
>Mature_280_residues
TFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWGY
ERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTGK
KQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSRD
KQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32187; Mature: 32056

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVPADSIKPEHIRRYMDKRGE
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
QSKTQANHEKSSMSRVYSWGYERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVLSVAPL
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCH
PVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCHHHHHHHHHHHH
LPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSR
CCCCEEEEECCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
DKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK
HHHHHCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA