Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

Click here to switch to the map view.

The map label for this gene is 30063428

Identifier: 30063428

GI number: 30063428

Start: 2038773

End: 2039252

Strand: Direct

Name: 30063428

Synonym: S2141

Alternate gene names: NA

Gene position: 2038773-2039252 (Clockwise)

Preceding gene: 30063415

Following gene: 30063431

Centisome position: 44.33

GC content: 54.37

Gene sequence:

>480_bases
ATGGATTCACGACCGGGCTTAAGGACCACCAGCCCGAGTTCCGGAACCAGAACAGGTCGAAGTAATACCCGCACATTACC
TCCAGATCCGTTGCTGGAATGTGCAGGACGGACGCGGTGGCCGTTCGGAATAAGGGAGCCTGACGAAGATTATCCAGTGA
CGATAATCGAGACTGAGGGCTTTCTTAATCTCGTATCCGTGTCTGCGGTAGCGCTGAATCAGCCATTCAGCCTGTTCTTC
GGTGCAGGGGTCGTGCTGATACCCGTCAGATTTGAATGCATGAGAACGCCGCCCGTGCCTGCTGGCAGGGGCGGCAGAGT
TATCCGAATTGTAAAATTTGGTATCGTGCGCCATCTGTTTTCTCTGCTGGCGCAGCAGGTGCCAGTTGTTCAGGCTGACG
GATGGATTGTAAACCAGAACGACCAGAAAAAACAAAACCCGCCGAAGCGGGTTAAGTGCGGGTGCGTTGAGGATGCCTGA

Upstream 100 bases:

>100_bases
CACTAGCGGCTGGCGAACGGCAGGAACGACCCCGGACGGCAGATTACGCATGCTTTTCGGTTCCGGCTCCACCAGTACCC
GGGTATTGTGGAATACCGGC

Downstream 100 bases:

>100_bases
CACATCAGCGGTGGCGAGGGATTTCTCCCCCGCCGGGTCTCTTACTCCTCAGGTTCGTAAGCTGTGAAGACAGCGACCTC
CGTCTGGCCGGTTCGGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MDSRPGLRTTSPSSGTRTGRSNTRTLPPDPLLECAGRTRWPFGIREPDEDYPVTIIETEGFLNLVSVSAVALNQPFSLFF
GAGVVLIPVRFECMRTPPVPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDA

Sequences:

>Translated_159_residues
MDSRPGLRTTSPSSGTRTGRSNTRTLPPDPLLECAGRTRWPFGIREPDEDYPVTIIETEGFLNLVSVSAVALNQPFSLFF
GAGVVLIPVRFECMRTPPVPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDA
>Mature_159_residues
MDSRPGLRTTSPSSGTRTGRSNTRTLPPDPLLECAGRTRWPFGIREPDEDYPVTIIETEGFLNLVSVSAVALNQPFSLFF
GAGVVLIPVRFECMRTPPVPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17482; Mature: 17482

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRPGLRTTSPSSGTRTGRSNTRTLPPDPLLECAGRTRWPFGIREPDEDYPVTIIETEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
FLNLVSVSAVALNQPFSLFFGAGVVLIPVRFECMRTPPVPAGRGGRVIRIVKFGIVRHLF
CEEHHHHHHHHHCCCHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHH
SLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDA
HHHHHHCCEEECCCEEECCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MDSRPGLRTTSPSSGTRTGRSNTRTLPPDPLLECAGRTRWPFGIREPDEDYPVTIIETEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
FLNLVSVSAVALNQPFSLFFGAGVVLIPVRFECMRTPPVPAGRGGRVIRIVKFGIVRHLF
CEEHHHHHHHHHCCCHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHH
SLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCGCVEDA
HHHHHHCCEEECCCEEECCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA