Click here to switch to the map view.

The map label for this gene is 30063419

Identifier: 30063419

GI number: 30063419

Start: 2030527

End: 2032023

Strand: Reverse

Name: 30063419

Synonym: S2128

Alternate gene names: NA

Gene position: 2032023-2030527 (Counterclockwise)

Preceding gene: 30063420

Following gene: 30063418

Centisome position: 44.18

GC content: 53.77

Gene sequence:

>1497_bases
ATGACGATAAGTTTTAATACTGTTCCGTCGAATACGCTGGTGCCGTTGTTCTACGCCGAGATGAACAATTCTGCGGCAAA
TACAGCGGTGACCAGCGCGCCTGCATTACTGATCGGGCATGCCAGCAACGATGCAGCCATTGAGGTTAACAGCCTGGTGC
TGATGCCATCGGCAGATTATGCCCGCCAGATTTGTGGGGCGGGGAGCCAGCTGGCGCGTATGGTGGAAGTCTACCGTCAG
ACAGATCCTTTCGGTGAACTGTATGTTATTGCAGTACCGGAAGCCAGAGGGGCGGCGGCGACGGTCAGGGTGACGGTTGC
CGGAGAAGCAGAGGAAAGCGGCACCCTGAGTCTGTATGTCGGGCGCTCCCGTGTACAGGTGCCTGTGGTGAATGGCGATG
ATGCCACTGCGGTTGCCACCGCGATTAAGGAAGCGGTAAACGGGGTTATCACCCTGCCGTTTACGGCGTCATCTGATGCA
GGCGTGGTGACGCTGACTGCCCGTCATAAGGGGCTGTATGGTAATGAGTTACCGGTCTGTCTGAATTATTATGGTTCTGG
TGGTGGTGAGATTTTGCCAGCAGGGCTTCGGGTGGTGACGGAAGTCGGTGCTGCCGGTAGCGGAGCGCCTGATCTTACCG
CCGCTGTTGCTGCTATGGGCGATGAGGCATTCGACTTTATCGGTCTGCCGTTCAACGATGCCGCCTCCATCAATATGATG
ATGACCGAAATGAATGACAGCAGCGGTCGCTGGAGTTATGCGCGCCAGTTATACGGGCATGTCTATACCGCAAAACTGGG
AACGCTGTCAGAGCTGGTTGGTGCCGGAGATATGCATAATCAGCAACATATCACGCTTGCCGGTTACGAAAAAGAAACCC
AGTCGCCTGTCGATGAACTGGTTGCCAGTCGCCTTGCCCGTGAAGCGGTATTTATCCGGAATGATCCTGCCCGTCCGACA
CAGACGGGGGAGCTGGTGGGGATGCTTCCGGCACCGAAAGGTAAGCGATTCATCATGACAGAGCAGCAGACCCTTTTATC
TCACGGCGTGGCGACGGCTTATGTGGAAGGCGGCACGTTGCAGATCCAGCGTTCCGTAACCACCTACAAAAAGAATGCGT
ATGGCGTGGCAGACAACAGCTATCTGGACAGTGAAACTCTGCATACCAGTGCATATGTTCTTCGCAAACTGAAATCGGTC
ATCACAAGCAAGTACGGACGTCACAAGCTGGCAAATGATGGTACCCGTTTTGGTCCGGGGCAGGCGATTGTCACTCCTGC
CGTTATCAAAGGGGAACTTCTGGCGACATATCGTCAGATGGAGCGTGCCGGTATTGTGGAAAATTACGATCTGTTTAAAC
AGTATCTGATAGTTGAGCGTGATGCAGATAACCCGAACCGACTGAATACGCTGTTCCCGCCGGATTATGTTAATCAGTTA
CGTGTCTTTGCGGTGGTTAACCAGTTCCGTCTTCAGTATTCAGAGGAGTCAGCATAA

Upstream 100 bases:

>100_bases
TGCCTTCCGAAGGGCGAAATGTGGAAGAAAGCAGCTACTGGTTCCGCCGTATAGCGGCGGGTGATGTGGTACGTGTTAAA
CAGGATAAGGCTAAAAAATC

Downstream 100 bases:

>100_bases
TGGCAAAGATCGCCGGAACCTGTTTTTTTAAAGTGGATGGTCAGCAGTTATCGCTGACAGGTGGCATTGAAGTGCCGATG
AACACCAATGTCCGGGATGA

Product: putative sheath protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MTISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICGAGSQLARMVEVYRQ
TDPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYVGRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDA
GVVTLTARHKGLYGNELPVCLNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMM
MTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDELVASRLAREAVFIRNDPARPT
QTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTLQIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSV
ITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQL
RVFAVVNQFRLQYSEESA

Sequences:

>Translated_498_residues
MTISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICGAGSQLARMVEVYRQ
TDPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYVGRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDA
GVVTLTARHKGLYGNELPVCLNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMM
MTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDELVASRLAREAVFIRNDPARPT
QTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTLQIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSV
ITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQL
RVFAVVNQFRLQYSEESA
>Mature_497_residues
TISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADYARQICGAGSQLARMVEVYRQT
DPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYVGRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDAG
VVTLTARHKGLYGNELPVCLNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMMM
TEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDELVASRLAREAVFIRNDPARPTQ
TGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTLQIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVI
TSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQLR
VFAVVNQFRLQYSEESA

Specific function: Major component of the tail [H]

COG id: COG4386

COG function: function code R; Mu-like prophage tail sheath protein gpL

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein L [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007067 [H]

Pfam domain/function: PF04984 Phage_sheath_1 [H]

EC number: NA

Molecular weight: Translated: 53428; Mature: 53297

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADY
CEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCHHH
ARQICGAGSQLARMVEVYRQTDPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYV
HHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEE
GRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDAGVVTLTARHKGLYGNELPVC
CCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEE
LNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMM
EEEECCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEE
MTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDEL
EEECCCCCCCHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCEEEEECCCCHHCCHHHHH
VASRLAREAVFIRNDPARPTQTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTL
HHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHCCCEEEEEECCEE
QIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPG
EEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQL
CEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHH
RVFAVVNQFRLQYSEESA
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASNDAAIEVNSLVLMPSADY
EEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCHHH
ARQICGAGSQLARMVEVYRQTDPFGELYVIAVPEARGAAATVRVTVAGEAEESGTLSLYV
HHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEE
GRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDAGVVTLTARHKGLYGNELPVC
CCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEE
LNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAAMGDEAFDFIGLPFNDAASINMM
EEEECCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEE
MTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAGDMHNQQHITLAGYEKETQSPVDEL
EEECCCCCCCHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCEEEEECCCCHHCCHHHHH
VASRLAREAVFIRNDPARPTQTGELVGMLPAPKGKRFIMTEQQTLLSHGVATAYVEGGTL
HHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHCCCEEEEEECCEE
QIQRSVTTYKKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLANDGTRFGPG
EEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAIVTPAVIKGELLATYRQMERAGIVENYDLFKQYLIVERDADNPNRLNTLFPPDYVNQL
CEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHH
RVFAVVNQFRLQYSEESA
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]