| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063418
Identifier: 30063418
GI number: 30063418
Start: 2030171
End: 2030527
Strand: Reverse
Name: 30063418
Synonym: S2127
Alternate gene names: NA
Gene position: 2030527-2030171 (Counterclockwise)
Preceding gene: 30063419
Following gene: 30063417
Centisome position: 44.15
GC content: 51.54
Gene sequence:
>357_bases ATGGCAAAGATCGCCGGAACCTGTTTTTTTAAAGTGGATGGTCAGCAGTTATCGCTGACAGGTGGCATTGAAGTGCCGAT GAACACCAATGTCCGGGATGACATCGTCGGCATGGCAGGGGATGTGGATTACAAGGAGACCTGGCGGTCACCTTACGTTA AGGGCACGTTTAAAGTGCCCAAAAACTTTCCGGTCGACAAAATTACCACCTCAGACCAGATGACGATTACCGCTGAGCTG GCAAACGGCATGGTGTATGTGCTTTCGGCGGCATGGCTGCACGGAGAGGCTAATCATAATGCCGAAGAAGGCACGGCAGA TCTTGAATTCCACGGCGAAGAGGGAGGGTATCAGTAA
Upstream 100 bases:
>100_bases ACCGACTGAATACGCTGTTCCCGCCGGATTATGTTAATCAGTTACGTGTCTTTGCGGTGGTTAACCAGTTCCGTCTTCAG TATTCAGAGGAGTCAGCATA
Downstream 100 bases:
>100_bases TGGCAATGAACGTTACAGAAATAGTTTTAAAAAAACCGGTGACAGCGCATAACGAAATGCTGCATGTGCTGGAGTTGCGC GAGCCCACGTATGACGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Tube Protein; Outer Membrane Receptor Protein; Phage Tail Protein
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MAKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVPKNFPVDKITTSDQMTITAEL ANGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ
Sequences:
>Translated_118_residues MAKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVPKNFPVDKITTSDQMTITAEL ANGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ >Mature_117_residues AKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVPKNFPVDKITTSDQMTITAELA NGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12876; Mature: 12744
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVP CCCCCCEEEEEECCCEEEEECCEECCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEEECC KNFPVDKITTSDQMTITAELANGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ CCCCCCEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure AKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDYKETWRSPYVKGTFKVP CCCCCEEEEEECCCEEEEECCEECCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEEECC KNFPVDKITTSDQMTITAELANGMVYVLSAAWLHGEANHNAEEGTADLEFHGEEGGYQ CCCCCCEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA