| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yecH
Identifier: 30063353
GI number: 30063353
Start: 1962190
End: 1962429
Strand: Reverse
Name: yecH
Synonym: S2045
Alternate gene names: 30063353
Gene position: 1962429-1962190 (Counterclockwise)
Preceding gene: 30063355
Following gene: 30063348
Centisome position: 42.67
GC content: 47.08
Gene sequence:
>240_bases ATGGACTCTATTCACGGTCATGAAGTGTTAAATATGATGATTGAATCAGGCGAGCAATATACGCATGCCAGTCTGGAAGC TGCGATTAAAGCGCGTTTTGGTGAACAGGCACGTTTTCACACGTGCTCGGCAGAAGGGGTGACAGCGGGAGAGCTGGTAG CGTTTCTGGCAGCAAAAGGCAAATTTATACCTTCAGAAGAAGGTTTTTCGACCGATCAGAGTAAGATTTGCCGTCACTGA
Upstream 100 bases:
>100_bases TGTGTAAATATAAATGTACAATAAAAGCATTCAGTCCTGCGCTGGCGCAAAGTCTTCATAAGCGGTAATCGCTACGCTAG GCTTTTTTTGAGGAGGAACG
Downstream 100 bases:
>100_bases TTTGAAACGGCGGCAGAAACCTGCCGCCGGAGAGCATTAGTTTTGTGTGTCGAGGGTAGAGAGTTCTTTGTCGATAAAAT ACAGACCTTCGCCGCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGVTAGELVAFLAAKGKFIPSEEGFSTDQSKICRH
Sequences:
>Translated_79_residues MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGVTAGELVAFLAAKGKFIPSEEGFSTDQSKICRH >Mature_79_residues MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGVTAGELVAFLAAKGKFIPSEEGFSTDQSKICRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788217, Length=79, Percent_Identity=96.2025316455696, Blast_Score=159, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019620 [H]
Pfam domain/function: PF10678 DUF2492 [H]
EC number: NA
Molecular weight: Translated: 8612; Mature: 8612
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGVTAGELVAFLAAKG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC KFIPSEEGFSTDQSKICRH CCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGVTAGELVAFLAAKG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC KFIPSEEGFSTDQSKICRH CCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]