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The map label for this gene is ynfA [H]

Identifier: 30063092

GI number: 30063092

Start: 1662244

End: 1662570

Strand: Reverse

Name: ynfA [H]

Synonym: S1719

Alternate gene names: 30063092

Gene position: 1662570-1662244 (Counterclockwise)

Preceding gene: 161486486

Following gene: 30063091

Centisome position: 36.15

GC content: 50.76

Gene sequence:

>327_bases
ATGATTAAAACAACGTTACTATTTTTTGCTACTGCGCTGTGTGAAATTATTGGATGCTTTCTGCCCTGGTTGTGGTTAAA
ACGAAACGCCAGTATCTGGCTGTTGCTTCCGGCGGGGATTTCACTGGCGCTGTTTGTCTGGTTGTTAACGTTGCATCCTG
CGGCGAGTGGGCGTGTTTACGCGGCTTATGGTGGCGTTTATGTCTGCACGGCATTGATGTGGCTGCGCGTTGTGGATGGC
GTGAAACTAAGTCTTTATGACTGGACGGGTGCGTTGATTGCGCTTTGCGGAATGTTGATCATTGTTGCGGGCTGGGGGCG
CACGTAG

Upstream 100 bases:

>100_bases
CTACACCATCCACTGCGAACGCAAAACGTACCAGGAGGATGTTTATATTGATGATATTATGTCGCCCTATAACTATACAT
GATGTCAATAAGTGACAAAG

Downstream 100 bases:

>100_bases
GAACATAAATCCATTTTATCAATAAGATACGAGGAAGTGTCAGCTGACAAAAGGTATTCTATTTCATCTTTTGTCAACCA
TTCACAGCGCAAATATACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRT

Sequences:

>Translated_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRT
>Mature_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRT

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=108, Percent_Identity=99.0740740740741, Blast_Score=209, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11906; Mature: 11906

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALMWLRVVDGVKLSLYDWTGALIALCGMLIIVAGWGRT
EECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALMWLRVVDGVKLSLYDWTGALIALCGMLIIVAGWGRT
EECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]