| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is tam [H]
Identifier: 30063078
GI number: 30063078
Start: 1648029
End: 1648787
Strand: Reverse
Name: tam [H]
Synonym: S1702
Alternate gene names: 30063078
Gene position: 1648787-1648029 (Counterclockwise)
Preceding gene: 30063079
Following gene: 30063072
Centisome position: 35.85
GC content: 54.68
Gene sequence:
>759_bases ATGTCTGACTGGAACCCCTCTTTATATCTGCACTTTTCCGCTGAACGATCGCGTCCGGCGGTGGAGCTGCTTGCCAGAGT GCCGCTGGAGAATGTCGAATATGTTGCCGATCTTGGCTGTGGCCCAGGTAACAGCACCGCCCTGCTGCATCAACGTTGGC CTGCGGCCAGGATAACAGGCATCGACTCGTCTCCGGCGATGATTGCTGAAGCGCGCAGTGCTTTGCCAGACTGCCAGTTC GTGGAAGCAGACATCCGCAACTGGCAACCGGAACAGGCACTCGATCTGATTTTTGCTAATGCCTCACTGCAATGGCTGCC CGACCACTACGAATTGTTTCCTCACTTGGTTTCTTTACTTAATCCGCAGGGCGTGCTGGCAGTACAGATGCCAGATAACT GGCTGGAGCCGACCCATGTGCTCATGCGCGAAGTTGCTTGGGAACAAAACTACCCGGATCGCGGGCGTGAGCCGTTGGCT GGCGTTCATGCTTACTACGATATTTTGAGCGAAGCCGGATGTGAGGTCGATATCTGGCGAACCACTTACTATCACCAGAT GCCGTCGCACCAGGCGATTATCGATTGGGTGACCGCCACTGGATTACGTCCGTGGTTACAGGATCTGACCGAGAGCGAAC AGCAGCTTTTTCTTACGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCA TTTCCGCGTCTGTTTATTGTTGCCCGCCGTACGGAGTAA
Upstream 100 bases:
>100_bases ACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGGTTGATGCCGTGAGGCTACAATTGGGGTAACG CGCTGACGGGAGTAAAAAAA
Downstream 100 bases:
>100_bases TTATCACGTCAGCTGGTAATGACGATCGGGAAGAATTTTTGCTGGAATTTCTGCTTCATCGTTCATCTGTAACAGGTCAA TTTCAATAGCGTTGCAGATG
Product: trans-aconitate 2-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEARSALPDCQF VEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLA GVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRYHQMLEEQYPLQENGQILLA FPRLFIVARRTE
Sequences:
>Translated_252_residues MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEARSALPDCQF VEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLA GVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRYHQMLEEQYPLQENGQILLA FPRLFIVARRTE >Mature_251_residues SDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEARSALPDCQFV EADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAG VHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRYHQMLEEQYPLQENGQILLAF PRLFIVARRTE
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate [H]
COG id: COG4106
COG function: function code R; Trans-aconitate methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family [H]
Homologues:
Organism=Escherichia coli, GI1787798, Length=252, Percent_Identity=98.4126984126984, Blast_Score=509, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR023149 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.144 [H]
Molecular weight: Translated: 28988; Mature: 28857
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLHQRWPAARITG CCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCEEEC IDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLL CCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHEECCCCEECCHHHHHHHHHHHHH NPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWR CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE TTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRYHQMLEEQYPLQENGQILLA HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FPRLFIVARRTE ECCEEEEEECCC >Mature Secondary Structure SDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLHQRWPAARITG CCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCEEEC IDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLL CCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHEECCCCEECCHHHHHHHHHHHHH NPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWR CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE TTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRYHQMLEEQYPLQENGQILLA HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FPRLFIVARRTE ECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA