| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeaN
Identifier: 30062950
GI number: 30062950
Start: 1507405
End: 1508466
Strand: Reverse
Name: yeaN
Synonym: S1548
Alternate gene names: 30062950
Gene position: 1508466-1507405 (Counterclockwise)
Preceding gene: 30062951
Following gene: 30062949
Centisome position: 32.8
GC content: 53.39
Gene sequence:
>1062_bases ATGACCTGTTCAACTTCATTAAGCGGCAAAAACAGGATTGTCCTTATCGCTGGCATTCTGATGATTGCCACAACATTACG CGTCACCTTTACCGGCGCAGCGCCGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTAT TAACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTCTGGCTGCCCCGGTGGCGCGACGTTTTGGTATGGAACGT AGCCTGTTTGCCGCGTTACTTTTGATCTGTGCAGGTATCGCAATTCGTTCTCTCCCTTCGCCTTACTTATTATTTGGCGG TACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCG TCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCT TTGAACGGTTTTGGCTGGCAAGGCGCGTTGTTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACA GTGGCGAAGTCAGCAACATGCAAATTTGAGTACCTCACGCGCCTTACATACTCGGGGTATCTGGCGTTCGCCACTTGCCT GGCAGGTAACATTGTTTCTTGGGATCAACTCACTGGTCTATTACGTGATTATTGGCTGGCTTCCGGCGATCCTCATCAGT CACGGCTATAGCGAAGCACAGGCGGGTTCACTGCATGGTTTGCTGCAACTAGCCACAGCAGCTCCCGGTTTGCTGATCGC ACTTTTCTTACATCATGTGAAAGACCAGCGTGGTATTGCAGCGTTCGTTGCCTTGATGTGCGCAGTGGGCGCGGTTGGGC TCTGCTTTATGCCAGCGCACGCGATCACCTGGACTCTGCTTTTCGGTTTTGGTTCCGGCGCAACAATGATACTGGGGTTG ACGTTCATTGGTCTTCGGCAAGTTCTGCGCATCAGGCGGCGGCACTCTCGGGGATGGCACAATCCGTCGGGTATTTGCTG GCAGCCTGTGGGCCGCCGCTAA
Upstream 100 bases:
>100_bases TCATTTTGTCCGAACTTAGCGATAATTTGTCATTTTAGCTTGATTCAACATAACAATAAAAACGGTAAGGTACAGCCTCG TTTGTAACAATGAGAAGCAT
Downstream 100 bases:
>100_bases TGGGTAAAATACACGATGCTAACGGTAACTGGTCCGTACCACTGATGGGTGTTGCAATACTTTCACTACTGATGGCGATT TTCGGACTTTGCGCCGGGAG
Product: putative amino acid/amine transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMER SLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA LNGFGWQGALFMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS HGYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGL TFIGLRQVLRIRRRHSRGWHNPSGICWQPVGRR
Sequences:
>Translated_353_residues MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMER SLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA LNGFGWQGALFMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS HGYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGL TFIGLRQVLRIRRRHSRGWHNPSGICWQPVGRR >Mature_352_residues TCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERS LFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLAL NGFGWQGALFMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILISH GYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLT FIGLRQVLRIRRRHSRGWHNPSGICWQPVGRR
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=326, Percent_Identity=99.3865030674847, Blast_Score=626, Evalue=0.0, Organism=Escherichia coli, GI1786536, Length=304, Percent_Identity=27.3026315789474, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 37702; Mature: 37570
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL CCCCCCCCCCCCEEHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHH LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALFMLMCFPLLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHEECCCCHHHHHHHHHHHHHHH LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS HHHHCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH CCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AITWTLLFGFGSGATMILGLTFIGLRQVLRIRRRHSRGWHNPSGICWQPVGRR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL CCCCCCCCCCCEEHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHH LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALFMLMCFPLLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHEECCCCHHHHHHHHHHHHHHH LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS HHHHCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH CCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AITWTLLFGFGSGATMILGLTFIGLRQVLRIRRRHSRGWHNPSGICWQPVGRR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]