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The map label for this gene is yoaB [H]

Identifier: 30062937

GI number: 30062937

Start: 1493507

End: 1493899

Strand: Reverse

Name: yoaB [H]

Synonym: S1534

Alternate gene names: 30062937

Gene position: 1493899-1493507 (Counterclockwise)

Preceding gene: 30062943

Following gene: 30062936

Centisome position: 32.48

GC content: 50.64

Gene sequence:

>393_bases
GTGGCAGTCTTTGCAGCACGAAAATGGAAGTATAATGAGGACAAAATGATGACTATCGTTCGTATCGATGCTGAAGCCCG
CTGGTCTGATGTAGTAATCCACAACAACACGCTCTACTACACTGGTGTACCGGAAAACCTCGACGCCGATGCCTTTGAGC
AAACCGCCAACACGCTGGCACAGATTGACGCCGTGCTGGAAAAACAGGGCAGCAATAAATCGAGCATTCTGGATGCCACC
ATTTTCCTGGCCGATAAAAACGACTTCGCGGCGATGAATAAAGCGTGGGATGCCTGGGTTGTCGCGGGTCATGCGCCGGT
GCGCTGCACGGTACAAGCGGGTTTGATGAACCCGAAGTATAAAGTTGAAATTAAGATTGTGGCTGCGGTGTAA

Upstream 100 bases:

>100_bases
GCAAAATCGTCCGTCACACTACCCCCTGTTGATTTGAACAGGGATTATGTCAGGATGAGGGCGCTTTCGCCAGTTGAAGT
GGTGACGGCAACCTCACATT

Downstream 100 bases:

>100_bases
GCTTTATCGAAGCAAAATAAGTCAGACGATAATTTATCGATAATACTGGTCGGTTTTACATAAATCGACCAGAGAATAAG
ATATTACTGTTGATGCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT
IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV

Sequences:

>Translated_130_residues
MAVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDAT
IFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
>Mature_129_residues
AVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATI
FLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=100, Blast_Score=234, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14464; Mature: 14332

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
CCEEECCCEECCCCEEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHH
QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKY
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHCCCCCEEEEECCCCEEEEEEECCCCCCE
KVEIKIVAAV
EEEEEEEEEC
>Mature Secondary Structure 
AVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
CEEECCCEECCCCEEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHH
QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKY
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHCCCCCEEEEECCCCEEEEEEECCCCCCE
KVEIKIVAAV
EEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]