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The map label for this gene is ydcK [H]

Identifier: 30062899

GI number: 30062899

Start: 1453879

End: 1454859

Strand: Reverse

Name: ydcK [H]

Synonym: S1492

Alternate gene names: 30062899

Gene position: 1454859-1453879 (Counterclockwise)

Preceding gene: 30062903

Following gene: 30062896

Centisome position: 31.63

GC content: 48.22

Gene sequence:

>981_bases
ATGCGCAAATATCGCCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAGTGTGTTATTACG
GCAGATTATCGCCATTAGCGATTTTAACGATGTGATAGCAGGAACCGCTGGCGGCTGGATCGATCGCGAAACGGTGTTAG
CACAGGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAACGGTGATTTCCGGTAATACGCGTATC
ACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAACGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGC
ATATATAAGTGACAGTGTCACCATTCATGACTCATTAGTTTACGTGCAATGTAGAATATTTGGTCACGCCTTAATTGATC
AACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTCCAAATTTATGATCGCGCAAGGGTT
AGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGTCCGGTATGCTTTTATTGAACATCGCGCCGA
AGTTTTTGATTTTGCCAGTGTTGAAGGTAATGAAGAGAACAACGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACG
CGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTG
GAAGGTAATTGTGTGTTAAAACATCATGTCTTGATTGGCGGAAATGCCGTGGTACGTGGTGGACCGATTCTGCTCGACGA
GCACGTTGTAATACAAGGTGAGAGCCGTATTACAGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCG
TCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAGCGCATTACGCGAACG
CCGCTGGCAGGGTTATTATGA

Upstream 100 bases:

>100_bases
TATAAAGTATATTTGAAATGCATTTTATGGAATTTTCTCGAGCATAGCCAGAGCCGCAGAATTTGCTACGGTTATAGTAA
GTCACCTGTGGGAAAACGCT

Downstream 100 bases:

>100_bases
ATCGATAATACGCGCGTATAAGTTCACATCATCATAGGCATCATTCAGGAACTCAGCCTGTTTCAGGCAACCTTCAAGGA
TAAAACCATTGCGCAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Sequences:

>Translated_326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL
>Mature_326_residues
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=98.4662576687116, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35895; Mature: 35895

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEECEEE
YVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC
>Mature Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEECEEE
YVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]