Click here to switch to the map view.

The map label for this gene is ycjJ

Identifier: 30062816

GI number: 30062816

Start: 1351939

End: 1353324

Strand: Reverse

Name: ycjJ

Synonym: S1383

Alternate gene names: 30062816

Gene position: 1353324-1351939 (Counterclockwise)

Preceding gene: 30062817

Following gene: 30062815

Centisome position: 29.42

GC content: 53.54

Gene sequence:

>1386_bases
ATGGCTATTAATTCACCACTGAATATTGCTGCGCAACCCGGCAAAACCCGTCTGCGAAAATCACTGAAATTGTGGCAGGT
GGTAATGATGGGTCTGGCCTATCTCACGCCGATGACCGTATTTGATACTTTTGGTATTGTCTCCGGCATTAGCGACGGTC
ACGTTCCGGCGTCCTATTTGCTGGCGCTGGCGGGCGTGCTGTTTACCGCTATCAGCTACGGCAAACTGGTTCGCCAGTTT
CCGGAGGCCGGTTCGGCCTATACCTACGCGCAAAAGTCGATTAACCCGCACGTCGGATTTATGGTCGGCTGGTCATCACT
GCTGGATTATCTCTTTTTGCCAATGATCAACGTTTTGTTGGCGAAAATCTATCTCTCCGCCCTCTTCCCGGAAGTGCCGC
CGTGGGTGTGGGTGGTAACCTTCGTCGCCATTTTAACCGCCGCGAATCTGAAGAGCGTCAACCTGGTCGCTAACTTCAAT
ACCCTGTTTGTACTGGTGCAAATCTCCATCATGGTGGTGTTTATCTTCCTGGTGGTTCAGGGACTGCATAAAGGAGAAGG
CGTTGGCACCGTCTGGTCACTTCAGCCGTTTATCAGCGAGAACGCGCACCTGATCCCGATTATTACCGGTGCGACGATTG
TCTGTTTCTCGTTCCTCGGTTTCGATGCGGTGACCACGCTTTCGGAAGAGACGCCGGACGCCGCACGCGTGATCCCGAAA
GCCATCTTCCTGACGGCGGTATACGGCGGCGTTATCTTTATCGCGGCGTCGTTCTTTATGCAGCTGTTCTTTCCCGATAT
CAGCCGCTTTAAAGACCCGGACGCCGCACTGCCTGAAATTGCGCTGTACGTCGGCGGCAAGCTCTTTCAGTCGATTTTCC
TCTGCACCACGTTTGTGAACACATTAGCGTCTGGCCTGGCTTCACATGCCAGCGTGTCGCGTCTGCTGTATGTGATGGGG
CGTGACAATGTGTTTCCGGAGCGCGTGTTTGGCTATGTGCACCCAAAATGGCGGACTCCGGCACTCAACGTCATTATGGT
CGGGATTGTCGCGCTGTCGGCGCTGTTCTTTGATTTAGTCACCGCGACAGCACTGATTAACTTCGGTGCTCTGGTGGCGT
TTACCTTCGTGAATCTGTCGGTGTTTAATCATTTCTGGCGGCGTAAAGGAATGAATAAAAGCTGGAAGGATCACTTCCAC
TATTTGCTGATGCCGCTGGTTGGCGCGCTGACGGTGGGTGTGCTGTGGGTTAACCTAGAGTCAACGTCACTGACACTCGG
TCTGGTATGGGCTTCGTTAGGCGGCGCATATTTGTGGTATCTGATCCGCCGCTATCGCAAAGTGCCGCTGTACGAAGGTG
ACAGAACGCCGGTGAGCGAAACGTAA

Upstream 100 bases:

>100_bases
GCTACTGACTGGACTCCGCCCCCTTTGCTTCCCTTGCTAAACAGGTTTGATTTCAGGTCGACACGACCGCAAACCTTATT
ACGCAGGGGAGGCAGCAATT

Downstream 100 bases:

>100_bases
TAGCCGGATGCGCGGCGCATTATCCTGCCTGAGGGTAACGCGCCGCGCCATTAACTATAAAAAGATGTATGACCCGGATC
ACGAGTGCTATCATCCGCCC

Product: putative amino acid/amine transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQF
PEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN
TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK
AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMG
RDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFH
YLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET

Sequences:

>Translated_461_residues
MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQF
PEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN
TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK
AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMG
RDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFH
YLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET
>Mature_460_residues
AINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFP
EAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNT
LFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKA
IFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGR
DNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHY
LLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET

Specific function: Imports putrescine [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI114326544, Length=425, Percent_Identity=22.8235294117647, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI114326550, Length=425, Percent_Identity=22.8235294117647, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4507047, Length=415, Percent_Identity=22.4096385542169, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI258614005, Length=412, Percent_Identity=23.0582524271845, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI258614003, Length=412, Percent_Identity=23.0582524271845, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081869, Length=461, Percent_Identity=99.7830802603037, Blast_Score=926, Evalue=0.0,
Organism=Escherichia coli, GI87082023, Length=446, Percent_Identity=63.9013452914798, Blast_Score=581, Evalue=1e-167,
Organism=Escherichia coli, GI1788480, Length=395, Percent_Identity=24.3037974683544, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87081708, Length=467, Percent_Identity=24.4111349036403, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786789, Length=175, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786602, Length=176, Percent_Identity=25.5681818181818, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87082250, Length=403, Percent_Identity=22.8287841191067, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786302, Length=173, Percent_Identity=26.0115606936416, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=408, Percent_Identity=23.7745098039216, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17533459, Length=404, Percent_Identity=24.5049504950495, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531343, Length=459, Percent_Identity=24.6187363834423, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24667468, Length=406, Percent_Identity=25.8620689655172, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24668806, Length=418, Percent_Identity=24.8803827751196, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21356285, Length=418, Percent_Identity=24.8803827751196, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24668802, Length=418, Percent_Identity=24.8803827751196, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281366235, Length=411, Percent_Identity=24.5742092457421, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI116007820, Length=411, Percent_Identity=24.5742092457421, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI116007818, Length=412, Percent_Identity=24.5145631067961, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI85725152, Length=412, Percent_Identity=24.5145631067961, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221512776, Length=396, Percent_Identity=20.959595959596, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666159, Length=396, Percent_Identity=20.959595959596, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161077963, Length=399, Percent_Identity=22.3057644110276, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50868; Mature: 50736

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
GLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK
HHCCCCCCCEEEECCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
STSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
GLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK
HHCCCCCCCEEEECCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
STSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]