| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062715
Identifier: 30062715
GI number: 30062715
Start: 1236262
End: 1237071
Strand: Reverse
Name: 30062715
Synonym: S1277
Alternate gene names: NA
Gene position: 1237071-1236262 (Counterclockwise)
Preceding gene: 30062716
Following gene: 30062714
Centisome position: 26.9
GC content: 54.57
Gene sequence:
>810_bases ATGCTCATTGATGATATTGATTTTGCAGACCTTTATCTGCAGCAACTCAAACTGGCTCACCGCACAGAAAAAACGCCCGA TCACTGGGATCAACGGGCGGAGAAAATGGCGGAAAATTGCGCCTCGCCAACGGACAGCTACCTGCAACAACTGATCGCTA AAATTGACCTGCAAGGCGCTCAGACCTTATTCGATATGGGCTGCGGACCAGGCACCGTATCGCTGGCGCTGGCTGACAAA CTCACTACGGTTTATGGCGTTGATTACAGTCAGGGGATGCTGAACGTTGCCGCCCGCCGCGCCGCCGCACTGAAGGCTGA CAATGTCCACTGGATCCAGCGCGCCTGGGAAGAGGACTGGAGTGACCTGCCACGCTGCGATATTGCCGTGGCTTCCCGCT CCACTCTGGTGGCTGATATGCGCCATGCAATGAGCAAACTGAATAATCAGGCACGGCTTCGCGTCTATACAACTCATCTG GTCAGCACCTCGTTCGTCTCTCCAGCCATTCAGCGGGCGGCTGGTCGGGAAGTGATCGAATTACCCAACTATATCTTTGC GCTCAACGTCCTGTATCAGATGGGAATTTATGCCCACGTTGATTTTATCCGTGGACAAAATTGCCAACAGGATAACAGCA CCTGGGAACGTTTTGAGCAGAACGTCAGCTGGAGTCTTGGCGCGCTTAACGACGATGAGCGTGAGCGGTTATATCACTGG TATCAACAACAAGATGCTCGTGCCCTCGCCCCTGCCAGCCGCGACTGGGCGCTCATCTGGTGGGATAGCGTACCGCAGGA GGCACTGTGA
Upstream 100 bases:
>100_bases GACCGAACAGTTAACAACGAACAAACTGGCGGCCCTGTATCGGGTTTCTGCCGACCAAATTCATCATCACCTCTCTGCAA TTAGCCGCTAAGGAACAATC
Downstream 100 bases:
>100_bases TGATTTTCCTTTCTCAGGCACAAATCGATGCGTTACTGCTGGAAGATATCCAGGGAGGTGACCTGACCACGCGAGCATTA AATATTGGACACCAGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLIAKIDLQGAQTLFDMGCGPGTVSLALADK LTTVYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDWSDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHL VSTSFVSPAIQRAAGREVIELPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYHW YQQQDARALAPASRDWALIWWDSVPQEAL
Sequences:
>Translated_269_residues MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLIAKIDLQGAQTLFDMGCGPGTVSLALADK LTTVYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDWSDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHL VSTSFVSPAIQRAAGREVIELPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYHW YQQQDARALAPASRDWALIWWDSVPQEAL >Mature_269_residues MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLIAKIDLQGAQTLFDMGCGPGTVSLALADK LTTVYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDWSDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHL VSTSFVSPAIQRAAGREVIELPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYHW YQQQDARALAPASRDWALIWWDSVPQEAL
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 30722; Mature: 30722
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLIAKIDLQGA CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH QTLFDMGCGPGTVSLALADKLTTVYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDW HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHLVSTSFVSPAIQRAAGREVIE HHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHH LPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYHW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHH YQQQDARALAPASRDWALIWWDSVPQEAL HHHCCCHHCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLIAKIDLQGA CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH QTLFDMGCGPGTVSLALADKLTTVYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDW HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHLVSTSFVSPAIQRAAGREVIE HHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHH LPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYHW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHH YQQQDARALAPASRDWALIWWDSVPQEAL HHHCCCHHCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]