Click here to switch to the map view.

The map label for this gene is 30062668

Identifier: 30062668

GI number: 30062668

Start: 1186255

End: 1186827

Strand: Direct

Name: 30062668

Synonym: S1222

Alternate gene names: NA

Gene position: 1186255-1186827 (Clockwise)

Preceding gene: 30062667

Following gene: 30062669

Centisome position: 25.79

GC content: 55.85

Gene sequence:

>573_bases
ATGGGTGAAAAAATTATGAAGAGTATGGAAATCCGGTCATCGGAAATCACCACCAGCGGAGCCGGTACGCTGACGGGCTA
CGTTGTTCGCTGGGATAAGCTTTCAGAACTGTTATGGGGTGAGTTTTACGAAAAATTCCAGCGGGGGGCGTTTACTGAAT
GGCTTGCGGCGGGTAATGACGTTCGCGGCCTGTATGAGCATGACCACAGCATGTTACTGGGGCGCACCCGTTCCGGCACG
CTGAAACTGGAAGAGGACGAAACAGGGTTACGCTTTGAACTGACCCCACCGGATACCAGTACAGGGCGCGACGTTATCGA
ACTGGTTAAGCGTGGGGACATCTCGGGGATGAGCTTTGGCTTTCGCTCCCGTAAGGATGTATGGGATACCACAACAGATC
CATGCGTGCGCACCGTGCTGGTGGCGGAACTGTACGAAATTACCGTTACATCGGTACCGGCTTACCCCGATTCCGGCGTG
GAGCTGGCCCGCCGTTCCCTGTATGAGCAGCACCCCGAAAAAATGCCGCGTGCGGATAATCGCCGCTGGTGGGCGGATTT
AGCGGGGGTGTGA

Upstream 100 bases:

>100_bases
CGGTGGCGTGGTGGATTCGAACGCGATCAAGATTCTGGCACTGCCGGAAGACGACGATTAACAGCATACAGAAGGGGCTA
AAAAGCCCCTTTAGTGTTTT

Downstream 100 bases:

>100_bases
TATGTGGCCTTTCAGACGAAAAAAAGAGCAGCGCAGCATGACGCTTGATGAATTTATGGCGCTGGCCGGCACATCGAACA
CGGGGGCGGGTGAGTACGTA

Product: putative head maturation protease of prophage CP-933C

Products: NA

Alternate protein names: Prohead Protease; HK97 Family Phage Prohead Protease; Caudovirus Prohead Protease; Prophage; Phage Head Maturation Protease; Phage Capsid Protease; Peptidase U; Phage Capsid Protein; Prophage Pi2 Protein; Phase Capsid Protein; HK97 Family Phage Capsid Protein; Capsid Protein; Phage-Related Head Maturation Protease; Head Maturation Protease Of Prophage; Phage-Related Prohead Protein; Prophage Lp3 Protein; Prophage Ps2 Protein; Protease; Prohead Protease Protein; Phage-Related Prohead Protease; Capsid Protease; Phage Pro-Head Protease

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGNDVRGLYEHDHSMLLGRTRSGT
LKLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGV
ELARRSLYEQHPEKMPRADNRRWWADLAGV

Sequences:

>Translated_190_residues
MGEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGNDVRGLYEHDHSMLLGRTRSGT
LKLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGV
ELARRSLYEQHPEKMPRADNRRWWADLAGV
>Mature_189_residues
GEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGNDVRGLYEHDHSMLLGRTRSGTL
KLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGVE
LARRSLYEQHPEKMPRADNRRWWADLAGV

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21588; Mature: 21456

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGND
CCHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
VRGLYEHDHSMLLGRTRSGTLKLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFG
CCHHHHCCCHHEEECCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCC
FRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGVELARRSLYEQHPEKMPRADN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
RRWWADLAGV
CHHHHHHCCC
>Mature Secondary Structure 
GEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYEKFQRGAFTEWLAAGND
CHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
VRGLYEHDHSMLLGRTRSGTLKLEEDETGLRFELTPPDTSTGRDVIELVKRGDISGMSFG
CCHHHHCCCHHEEECCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCC
FRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGVELARRSLYEQHPEKMPRADN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
RRWWADLAGV
CHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA