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The map label for this gene is ycfX

Identifier: 30062652

GI number: 30062652

Start: 1169227

End: 1170138

Strand: Direct

Name: ycfX

Synonym: S1203

Alternate gene names: 30062652

Gene position: 1169227-1170138 (Clockwise)

Preceding gene: 30062651

Following gene: 30062653

Centisome position: 25.42

GC content: 52.41

Gene sequence:

>912_bases
ATGTATTACGGGTTTGATATTGGTGGAACAAAAATTGCGCTTGGCGTGTTTGATAGCGGTCGGCAGTTGCAGTGGGAAAA
GCGGGTGCCGACACCGCGTGACAGCTATGACGCATTTTTAGATGCAGTGTGTGAGCTGGTAGCTGAAGCTGACCAACGTT
TTGGCTGTAAAGGTTCTGTCGGCATCGGTATTCCGGGAATGCCGGAAACAGAAGATGGTAAGCTGTATGCCGCTAATGTC
CCCGCTGCCAGCGGCAAACCGCTGCGTGCCGACCTGAGCGCACGTCTTGATCGCGATGTACGCCTTGATAACGATGCCAA
CTGTTTTGCCCTTTCAGAAGCCTGGGATGATGAATTTACGCAATATCCACTGGTGATGGGGTTAATTCTCGGCACCGGCG
TTGGCGGCGGGCTGGTTTTCAACGGCAAACCGATTACTGGTAAAAGCTACATTACCGGCGAGTTTGGCCATATGCGTCTG
CCGGTTGATGCGTTAACCATGATGGGGTTGGATTTCCCGTTACGCCGCTGCGGCTGTGGTCAGCATGGCTGCATTGAAAA
TTATCTGTCTGGTCGCGGTTTTGCGTGGCTGTATCAACACTATTATCATCAACCGTTGCAGGCTCCCGAAATTATTGCGC
TTTATGATCAAGGCGATGAGCAGGCAAGGGCGCACGTTGAGCGTTATCTGGATTTATTAGCGGTTTCTCTGGGAAATATC
CTGACCATTGTTGACCCTGACCTGGTCGTCATTGGTGGTGGCTTATCGAATTTCCCGGCAATCACAACGCAACTGGCGGA
CAGGTTGCCTTGTCATCTCTTACCTGTAGCTCGTGTTCCGCGCATTGAACGCGCGCGCCACGGTGATGCGGGAGGAATGC
GTGGTGCGGCCTTCCTACATCTAACCGATTAA

Upstream 100 bases:

>100_bases
CTTTTGGCAAGTTGGTATCCGGCGCGGCGCGCCAGTAATATTGACCCTGCGCGAGTCCTTAGCGGCCAGTAAAGGCAGTA
CATTAAAACAAGGAGCGGCA

Downstream 100 bases:

>100_bases
ACAACAGAGGTTGCTATGCTGTCGCGTCGGGGTCATCGGTTAAGTCGTTTTCGTAAAAATAAACGTCGCCTGCGCGAGCG
TTTGCGTCAGCGTATTTTTT

Product: N-acetyl-D-glucosamine kinase

Products: NA

Alternate protein names: GlcNAc kinase [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGKLYAANV
PAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRL
PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVSLGNI
LTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPVARVPRIERARHGDAGGMRGAAFLHLTD

Sequences:

>Translated_303_residues
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGKLYAANV
PAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRL
PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVSLGNI
LTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPVARVPRIERARHGDAGGMRGAAFLHLTD
>Mature_303_residues
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGKLYAANV
PAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRL
PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVSLGNI
LTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPVARVPRIERARHGDAGGMRGAAFLHLTD

Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=303, Percent_Identity=98.6798679867987, Blast_Score=610, Evalue=1e-176,
Organism=Escherichia coli, GI87081733, Length=306, Percent_Identity=40.8496732026144, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1790522, Length=312, Percent_Identity=29.8076923076923, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082230, Length=260, Percent_Identity=30, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: =2.7.1.59 [H]

Molecular weight: Translated: 32987; Mature: 32987

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS01125 ROK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSV
CEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GIGIPGMPETEDGKLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEECCHHCCHHH
QYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCG
HHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEECCHHHHHHHCCCCCHHHCCCC
QHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVSLGNI
CCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCE
LTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPVARVPRIERARHGDAGGMRGAAFLH
EEEECCCEEEECCCCCCCCHHHHHHHHHCCEEEECHHCCCCHHHHCCCCCCCCCCEEEEE
LTD
ECC
>Mature Secondary Structure
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSV
CEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GIGIPGMPETEDGKLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCCEEEECCHHCCHHH
QYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCG
HHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEECCHHHHHHHCCCCCHHHCCCC
QHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVSLGNI
CCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCE
LTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPVARVPRIERARHGDAGGMRGAAFLH
EEEECCCEEEECCCCCCCCHHHHHHHHHCCEEEECHHCCCCHHHHCCCCCCCCCCEEEEE
LTD
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA