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The map label for this gene is ycfL

Identifier: 30062637

GI number: 30062637

Start: 1152856

End: 1153233

Strand: Direct

Name: ycfL

Synonym: S1188

Alternate gene names: 30062637

Gene position: 1152856-1153233 (Clockwise)

Preceding gene: 30062636

Following gene: 30062638

Centisome position: 25.07

GC content: 49.47

Gene sequence:

>378_bases
ATGAGAAAAGGATGCTTTGGGCTGGTGTCTCTGGTGTTGTTACTGCTGGTGGGCTGTCGTTCACATCCGGAAATTCCGGT
GAATGATGAGCAATCGCTGGTGATGGAGTCATCTTTATTGGCTGCGGGCATCAGTGCAGAAAAGCCCGTCCTTTCGACGT
CTGATATTCAACCTTCAGCATCCTCAACGATTTATAACGAAAGGCAAGAACCCGTTACCGTTCATTATCGTTTTTACTGG
TATGACGCCAGAGGGCTGGAGATGCATCCTCTGGAAAGGCCACGCAGCGTTACCATTCCCGCACATTCGGCGGTAACGCT
GTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACTTTATCTATATTTGTAA

Upstream 100 bases:

>100_bases
ATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTG
GCGCATAAAGGTCTGTAACG

Downstream 100 bases:

>100_bases
AGGGGTGAATCTTGATGACAAAAATGAGTCGCTACGCCTTGATTACCGCGCTGGCGATGTTTCTCGCCGGGTGTGTGGGG
CAACGTGAACCTGCACCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTIYNERQEPVTVHYRFYW
YDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL

Sequences:

>Translated_125_residues
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTIYNERQEPVTVHYRFYW
YDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
>Mature_125_residues
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTIYNERQEPVTVHYRFYW
YDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787347, Length=125, Percent_Identity=98.4, Blast_Score=254, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 13933; Mature: 13933

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SSTIYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVR
CCCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEE
LYLYL
EEEEC
>Mature Secondary Structure
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SSTIYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVR
CCCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEE
LYLYL
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]