Click here to switch to the map view.

The map label for this gene is insF1 [C]

Identifier: 30062590

GI number: 30062590

Start: 1104738

End: 1104962

Strand: Direct

Name: insF1 [C]

Synonym: S1135

Alternate gene names: 30062590

Gene position: 1104738-1104962 (Clockwise)

Preceding gene: 30062589

Following gene: 30062593

Centisome position: 24.02

GC content: 46.22

Gene sequence:

>225_bases
ATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCA
CTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAGCGTCGTC
ACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATAGCTGCTTAA

Upstream 100 bases:

>100_bases
AGCGCCCACCTGCCGGGCTAATCCACCACTCTGATCGAGGTTCCAGTACTGCGCATACGATTACCGGGTCATACAGGAGC
AGTCTGGTCTGAAAACATCA

Downstream 100 bases:

>100_bases
AAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCACATTTGATGATACCCCTGAACAAGTTGACTGATAGCG
GATTACTTGATACAGAAGCC

Product: IS600 orfB

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA

Sequences:

>Translated_74_residues
MSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA
>Mature_73_residues
SRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=68, Percent_Identity=47.0588235294118, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1787263, Length=68, Percent_Identity=47.0588235294118, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1786753, Length=68, Percent_Identity=47.0588235294118, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1786570, Length=68, Percent_Identity=47.0588235294118, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1786490, Length=68, Percent_Identity=47.0588235294118, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1789981, Length=66, Percent_Identity=45.4545454545455, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 8856; Mature: 8725

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNI
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPAAFREKYHQIAA
CHHHHHHHHHHHCC
>Mature Secondary Structure 
SRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNI
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPAAFREKYHQIAA
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]