| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062551
Identifier: 30062551
GI number: 30062551
Start: 1067466
End: 1068653
Strand: Reverse
Name: 30062551
Synonym: S1087
Alternate gene names: NA
Gene position: 1068653-1067466 (Counterclockwise)
Preceding gene: 30062552
Following gene: 30062549
Centisome position: 23.23
GC content: 54.29
Gene sequence:
>1188_bases ATGCTCCCCCGTTTTGCCGATATTTTTCAGCAGGGAAACCGCTGGCTTAACTGGCTGGAGAAACAACCGGAAGGGGCAGT CCGTCCGGTGGTAATTGAATCAGTGACAAAAATCATGGCCTGCGGGACCACACTGATGGGGTACACGAACAGGTGTTGTT CATCACCGGACTGTTGCCATACAAAAAAGGTCTGCTTCCGGTGTAAAAGCCGCTCCTGCCCGCACTGCGTGGTGAAGGCT GGCGCACAGTGGATACAGTATCTGCTGAGCCTGGTCCCCTACTGCCCGTGGCAGCATATTGTGTTCACACTTCCCTGCCA GTACTGGTCCCTGGTGTTCCACAACCGTTGGTTACTGGCAAAGATGAGCCGCATTGCAGCGGATGTGATACTGGAAATCT GCCATCAGGCAGATGTGGAGCCGGGGATATTCACGGTGATCCACACATGGGGGCGTGACCAGCAGTGGCATCCGCATATC CATTTATCGACAACTGCCGGTGGTGTGACGTCGGGCCACACCTGGAAAAATCTTCATTTTTACGCCCGTAAGGTGATGAG CATGTGGCGCTACCGGATAACACGGTTGCTGTCACGGAAATACCCTTACCTGGTGATGCCGGATGCGCTGGCAGCAGAAG GAAGCAGTAAACGGGAATGGAATCGCTTCCTGGACACGCATTACCGCCGTGGCTGGAATGTCAACGTATCCCGGGTAATG GATAATGCCACCCATGTGGCGGTGTACTTTGGCTCTTACCTGAAAAAGCCACCGGTGCCGATGAGTCGTCTGGAGCATTA TGCCGGTCAGGATGAAATCGGTCTGCGTTACAACAGTCACCGAACAAAACGGGAAGAATACCTGTTGATGAGTGGAGATG AGTCCATGGAAAGGTTCTCCTGGCATGTGGCGGATAAGGGGTTCCGTATGGTGAGGTACTACGTTTTTTTAAGTCCGGCG AAACGGCGGTTACTGGAAGAAGTGGTGTACATCATAACGGAGACAGTGAGAAAAACGGCGATGCAAATCACCTGGAGAGG GATGTATCAGAGGTTACTGAAGGTTGACCCGCTGAAGTGCGTGCTGTGCGGGAGTCAGATGCGTTTTACGGGGCTGAAGC GGGGCTACCGTCTGGCAGAGCAGGTCCTGATGCATGAGCCGCTGGCCCGGATGCGGTGGTGCGGCTGA
Upstream 100 bases:
>100_bases CGGGAATTTGCGACCATTCTTGCCGGTATCAGCGCCGGCGGTATGTACTGCCCGGAGTGTGGCACGGTTCACTGGCCGGA CTGAGTCGCCCCGCCTTCTG
Downstream 100 bases:
>100_bases GAGCCGCAGAGGGGAAGTTGCGTCCATTTTGAGGGAAACGGAGCAAAAAACCGCCATTCATACCCTGAATCAATCAGAGC CATCCAGTTTAATCGTCGGT
Product: IS91
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTNRCCSSPDCCHTKKVCFRCKSRSCPHCVVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAKMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG
Sequences:
>Translated_395_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTNRCCSSPDCCHTKKVCFRCKSRSCPHCVVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAKMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG >Mature_395_residues MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTNRCCSSPDCCHTKKVCFRCKSRSCPHCVVKA GAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLAKMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPA KRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 46426; Mature: 46426
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTNRCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCVVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCHHHHH KMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFS CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHH WHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKC HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYTNRCCSSPDCCH CCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCH TKKVCFRCKSRSCPHCVVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQYWSLVFHNRWLLA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCHHHHH KMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHIHLSTTAGGVTSGHTWKNLHF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH YARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKREWNRFLDTHYRRGWNVNVSRVM HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH DNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDESMERFS CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHH WHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITETVRKTAMQITWRGMYQRLLKVDPLKC HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1646375 [H]