Click here to switch to the map view.

The map label for this gene is 30062406

Identifier: 30062406

GI number: 30062406

Start: 908098

End: 908637

Strand: Direct

Name: 30062406

Synonym: S0924

Alternate gene names: NA

Gene position: 908098-908637 (Clockwise)

Preceding gene: 30062403

Following gene: 30062407

Centisome position: 19.74

GC content: 50.93

Gene sequence:

>540_bases
ATGTTGAATGTAGCTATTGAAAACCAGAACGGGTGGAATTATAGTGCACCTGCACCTCATAAAACGGGTGCCGGGATTGC
TACCCCGACGATGACTACTGCGCATAACCGCGCTCAGGCGGTTTTTTTATGCGTCAAGCACAGCCACATTCAGATTATGG
TGGGGCGTGCAGGGCAGCCGCAAGGCTGGCCGGTTTCGGTAGTCACCGGTTGTAGCAACCCTGTGCGTCTCACCACCCAT
GAGATTGCTACCTCTGGTGGTGAGTCATTTAAACTGACTATCGAGGCTGCCATCATGGCTACTATCCTTACCCTTTCTCA
CCCTGACGCAACCATCGAAAATGGTCGCGCTGTCACTACGTCTGTTGCGGTTGCGGAGTTCTTCCGGAAAATGCACAAAA
CGTTATTCAGAAGATCGAAACTCTCGAATGCTCGCCGGAGTTTAACCGGCTTAATTTTAAGCCCGTCACCTATACCGACG
CCAAAGGCGAAAAACGCCCAATGTACCAAATCACCAAAAACGGCTTCGTTTTCCTGGTGA

Upstream 100 bases:

>100_bases
GGTGGGAAAGCCAACTGTAATTGTTAACTGGTTAACGTCACCTGGAGGCACCAGGCACCGCATCAACAAAGTTCACTTCG
GTGATGAAAGGAAAGAGAAA

Downstream 100 bases:

>100_bases
TGGGCTTCACTGGCAAAAAAGCCGCCGCATTCAAGGAAGCCTACATTGCTGAGTTCGACCGCATGGAGGCCGAACTGCGC
CAGAATAACACCCCACCTGC

Product: putative bacteriophage protein

Products: NA

Alternate protein names: Bacteriophage Protein; Antirepressor Phage; CI Repressor; Phage Regulatory Protein Rha Family; Prophage CI Repressor; Protein Ash; Lcd-Like Protein Phage Origin; Rha Family Phage Regulatory Protein; Phage Immunity Protein; Immunity Region Phage

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQPQGWPVSVVTGCSNPVRLTTH
EIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTTSVAVAEFFRKMHKTLFRRSKLSNARRSLTGLILSPSPIPT
PKAKNAQCTKSPKTASFSW

Sequences:

>Translated_179_residues
MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQPQGWPVSVVTGCSNPVRLTTH
EIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTTSVAVAEFFRKMHKTLFRRSKLSNARRSLTGLILSPSPIPT
PKAKNAQCTKSPKTASFSW
>Mature_179_residues
MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQPQGWPVSVVTGCSNPVRLTTH
EIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTTSVAVAEFFRKMHKTLFRRSKLSNARRSLTGLILSPSPIPT
PKAKNAQCTKSPKTASFSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19202; Mature: 19202

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCEEEEEEECCCCC
QGWPVSVVTGCSNPVRLTTHEIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTT
CCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEH
SVAVAEFFRKMHKTLFRRSKLSNARRSLTGLILSPSPIPTPKAKNAQCTKSPKTASFSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCEEEEEEECCCCC
QGWPVSVVTGCSNPVRLTTHEIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTT
CCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEH
SVAVAEFFRKMHKTLFRRSKLSNARRSLTGLILSPSPIPTPKAKNAQCTKSPKTASFSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA