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The map label for this gene is ydaU [H]

Identifier: 30062399

GI number: 30062399

Start: 903683

End: 904321

Strand: Reverse

Name: ydaU [H]

Synonym: S0917

Alternate gene names: 30062399

Gene position: 904321-903683 (Counterclockwise)

Preceding gene: 30062400

Following gene: 30062398

Centisome position: 19.66

GC content: 47.1

Gene sequence:

>639_bases
ATGGCTTCAAACTGGATAAAGCTCGAGGTTATTACGCCGGATAAGCCGGAAATATTCAGGCTTGCTGAGATTCTGAATAT
TGATCCAGATGCCGCATTAGGGAAGGTTATTCGCTTCTGGGCATGGGCGGATCAACAAATGATAGACGGTAATGCAGATT
GTAACGCTCGCGGCGTTACAAAAAGTGCAATAGATCGCATCACTTTTATGTCTGGTTTTGCTGATGCGTTAATTCAGGTT
GGATGGCTGGTCGAAAATGACGGTGGGCTTTCTCTACCTAACTTTGAACGTCATAACGGAAAAAGCTCTAAAAAACGGGC
GGTTACAAACGAGCGAGTAACAAAAATACGCGAACTGAAACGAAAAGGTAACGCTGCCAGCGTTACACAAACGGATCAAA
AAGCGTTACCAGTGGAAGAGGAAGAGGAAGATCTAAATACTGATCTCCCCCTAAATCCCCCTCGCCAAAAACGAGCGTCT
AAAAAATTCGAGCCGGAGGCTATTGAGCTGCCCGATTGGTTGCCGGAAACACTCTGGCATGAGTGGGTCCGGTTCAGACA
GGCATTGCGAAAACCGATTCGAACGGAGCAGGGCGATACGGGAACTGGAAAAATTCCGTCAGCAGGGTTTTACACCTGA

Upstream 100 bases:

>100_bases
GCGATTCTGTCGTAGTGCATTGATTGAAATTAATCGTGCCGGATTGTTTTGTTCGGTATCAGTTAAATGTAACGCTGCGA
GCGTTACAAGGTGAAAACAA

Downstream 100 bases:

>100_bases
GCAGGTGATTCGACACAGCATCGCCAATGAATACCAGGGCCTGTTCGCGCCGAAAGGTGTTCGGCCTGAGACGTTGCTCC
GACAGGTTAACACCGTCTCG

Product: putative bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVTKSAIDRITFMSGFADALIQV
GWLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELKRKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRAS
KKFEPEAIELPDWLPETLWHEWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT

Sequences:

>Translated_212_residues
MASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVTKSAIDRITFMSGFADALIQV
GWLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELKRKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRAS
KKFEPEAIELPDWLPETLWHEWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT
>Mature_211_residues
ASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVTKSAIDRITFMSGFADALIQVG
WLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELKRKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRASK
KFEPEAIELPDWLPETLWHEWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=63, Percent_Identity=61.9047619047619, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 23994; Mature: 23863

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVT
CCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCH
KSAIDRITFMSGFADALIQVGWLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELK
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
RKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRASKKFEPEAIELPDWLPETLWH
HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
EWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWADQQMIDGNADCNARGVT
CCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCH
KSAIDRITFMSGFADALIQVGWLVENDGGLSLPNFERHNGKSSKKRAVTNERVTKIRELK
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
RKGNAASVTQTDQKALPVEEEEEDLNTDLPLNPPRQKRASKKFEPEAIELPDWLPETLWH
HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
EWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]