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The map label for this gene is ybeQ

Identifier: 30062167

GI number: 30062167

Start: 670199

End: 671182

Strand: Direct

Name: ybeQ

Synonym: S0659

Alternate gene names: 30062167

Gene position: 670199-671182 (Clockwise)

Preceding gene: 30062164

Following gene: 30062169

Centisome position: 14.57

GC content: 46.54

Gene sequence:

>984_bases
ATGATAATGATTTTTACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTG
CGAGGCTCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGACTCTCCGGACGACGAAAAGGCCTTTTACT
GGCTGAAGCTGGCCGCTGAGCAAGGTCATTGTGAAGCACAGTATTCCTTAGGGCAAAAGTATACCGAGGATAAAAGCCGT
CATAAAGATAATGAGCAAGCCATCTTCTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGG
CTGGATACTGGATCGTGGAGAAGACCCCAACTATAAAGAAGCGGTTACCTGGTATCAGATAGCCGCGGAGAGCGGAATGT
CTTATGCGCAAAATAATCTTGGATGGATGTACAGAAATGGCAACGGAGTCGCACAAGACTATACGCTGGCATTTTTCTGG
TACAAACAAGCTGCATTACAAGGCCATAGTTACGCACAAGACAATCTGGCCGATCTTTATAAAGACGGAGAAGGCGTTGC
TCAAAACAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCACGCCCAGTTTCAAATTGCAT
GGGATTATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGAA
AGCGTCGGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCTGCCTTTGA
ATGGTTTACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAA
GACCTGTCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGAACCAGAGATGTCAGTCAGGAAATT
CGTGAGACTGAAGCTTTACTGTAG

Upstream 100 bases:

>100_bases
ATTTATACTTTTCTGACGCAACATAATACGCATAAAATAAGGCTTACGCAAAAATGGAACACATAAAAATATAATATATT
TTATCTACAACCATAAGGAA

Downstream 100 bases:

>100_bases
AAATAAAAACAAGGGCCGGGGAATTTCATTCTGCCCATATTCTCTTTATTGCTGTGCGAAATCAGACTATTACGGCTCAA
ACGGGCGTCTCTGGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFW
YKQAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEALL

Sequences:

>Translated_327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFW
YKQAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEALL
>Mature_327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFW
YKQAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEALL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=311, Percent_Identity=28.9389067524116, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI151301150, Length=324, Percent_Identity=29.320987654321, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=96.6153846153846, Blast_Score=646, Evalue=0.0,
Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=36.2204724409449, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=25.2365930599369, Blast_Score=95, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=275, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=29.5819935691318, Blast_Score=108, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37441; Mature: 37441

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAE
CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
QGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKE
CCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCHHHEEECCCCCCHHH
AVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYKQAALQGHSYAQDNLADLY
HHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCHHEEEEHHHHHHHHCCCCCCHHHHHHHH
KDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
HCCCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQ
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHH
ALDLYRKVQSSGTRDVSQEIRETEALL
HHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAE
CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
QGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKE
CCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCHHHEEECCCCCCHHH
AVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYKQAALQGHSYAQDNLADLY
HHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCHHEEEEHHHHHHHHCCCCCCHHHHHHHH
KDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
HCCCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQ
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHH
ALDLYRKVQSSGTRDVSQEIRETEALL
HHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]