| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is arcC
Identifier: 30062005
GI number: 30062005
Start: 468821
End: 469714
Strand: Direct
Name: arcC
Synonym: S0460
Alternate gene names: 30062005
Gene position: 468821-469714 (Clockwise)
Preceding gene: 30062000
Following gene: 30062010
Centisome position: 10.19
GC content: 57.16
Gene sequence:
>894_bases ATGAAAACACTGGTTGTAGCTCTTGGGGGCAACGCCTTACTCCAGCGCGGTGAGGCGCTGACGGCGGAAAATCAATATCG CAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGCTGGCGATTGTTCACGGCAACGGGCCGC AGGTGGGGCTGCTGGCGTTACAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGATGTACTGGTGGCGGAAAGC CAGGGGATGATTGGCTATATGCTGGCGCAGAGCTTGAGCGCACAGCCGCAGATGCCGCCTGTTACGACGGTGCTGACGCG CATTGAGGTTTCGCCTGATGATCCGGCGTTTTTGCAGCCAGAGAAATTTATTGGTCCGGTTTATCAGCCAGAAGAACAAG AGGCACTGGAAGCGGCTTACGGCTGGCAGATGAAACGTGATGGTAAATATTTGCGCCGGGTGGTGGCGTCTCCGCAACCG CGTAAAATTCTCGACAGCGAAGCCATCGAGTTGTTGCTCAAAGAGGGGCATGTGGTGATTTGCAGTGGCGGCGGCGGTGT GCCTGTGACGGAAGATGGGGCAGGGAGTGAAGCGGTGATTGATAAAGATCTCGCCGCTGCGTTGCTCGCCGAGCAGATTA ATGCCGATGGACTGGTGATCCTCACCGATGCTGATGCGGTATATGAAAACTGGGGAACGCCGCAGCAACGTGCCATTCGC CATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAAGGTAACGGCGGTGAGTGGTTA TGTCAGAAGCCGTAGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCT GTATTTCGCTGTAG
Upstream 100 bases:
>100_bases CCGCTGTTGCGATTGATTCGCTGCTGGCGCTGGGGCATACGTCAGGGGCAGATACGCTGCTGGGGTTCTGGCTTGGCCAA CAATTATTACAAGGAAAACC
Downstream 100 bases:
>100_bases TGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAATGGGTACCCG GAGCGGTAAGCCGGATAAGG
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAES QGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP RKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR HATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAWIGALSRIEETLAGEAGTCISL
Sequences:
>Translated_297_residues MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAES QGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP RKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR HATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAWIGALSRIEETLAGEAGTCISL >Mature_297_residues MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAES QGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP RKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR HATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAWIGALSRIEETLAGEAGTCISL
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=297, Percent_Identity=98.989898989899, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI1789238, Length=312, Percent_Identity=39.4230769230769, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1786516, Length=313, Percent_Identity=38.3386581469649, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 31703; Mature: 31703
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLAL CCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHH QNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQP HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCC EKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVI HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEE CSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCHHHHHHH HATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAWIGALSRIEETLAGEAGTCISL CCCHHHHCCHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLAL CCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHH QNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQP HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCC EKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVI HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEE CSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCHHHHHHH HATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAWIGALSRIEETLAGEAGTCISL CCCHHHHCCHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]