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The map label for this gene is gip

Identifier: 30062000

GI number: 30062000

Start: 465242

End: 465523

Strand: Direct

Name: gip

Synonym: S0454

Alternate gene names: 30062000

Gene position: 465242-465523 (Clockwise)

Preceding gene: 30061999

Following gene: 30062005

Centisome position: 10.12

GC content: 46.45

Gene sequence:

>282_bases
ATGTTACGTTTCTCTGCTAATTTATCGATGTTATTTGGTGAATATGATTTTCTCGCCCGTTTTGAGAAAGCTGCGCAGTG
TGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACAGGTACTGGCGAGTAATAAAC
TCGAACATACGCTGCACAATTTACCGGCAGGTGACTGGGCGGCGGGCGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAA
GAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTGGTAA

Upstream 100 bases:

>100_bases
CGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCGGATGCACCGACTGAAACCTGCTTCATGCACT
ATGAATAAGGGAGATAAATG

Downstream 100 bases:

>100_bases
TGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAAC
GACAGTGACTTCCGTCCCAG

Product: glyoxylate-induced protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHNLPAGDWAAGERGIACIPGRE
EEFRDGVAAAIRW

Sequences:

>Translated_93_residues
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHNLPAGDWAAGERGIACIPGRE
EEFRDGVAAAIRW
>Mature_93_residues
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHNLPAGDWAAGERGIACIPGRE
EEFRDGVAAAIRW

Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]

COG id: COG3622

COG function: function code G; Hydroxypyruvate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Homo sapiens, GI300068964, Length=93, Percent_Identity=43.010752688172, Blast_Score=66, Evalue=5e-12,
Organism=Homo sapiens, GI300068962, Length=93, Percent_Identity=43.010752688172, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786718, Length=93, Percent_Identity=97.8494623655914, Blast_Score=190, Evalue=1e-50,
Organism=Escherichia coli, GI1789095, Length=93, Percent_Identity=43.010752688172, Blast_Score=81, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17552022, Length=91, Percent_Identity=39.5604395604396, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017643
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.22 [H]

Molecular weight: Translated: 10606; Mature: 10606

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHN
CEEECCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHH
LPAGDWAAGERGIACIPGREEEFRDGVAAAIRW
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHN
CEEECCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHH
LPAGDWAAGERGIACIPGREEEFRDGVAAAIRW
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8440684; 10561547; 9278503 [H]