| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is hemH
Identifier: 30061975
GI number: 30061975
Start: 434277
End: 435239
Strand: Direct
Name: hemH
Synonym: S0427
Alternate gene names: 30061975
Gene position: 434277-435239 (Clockwise)
Preceding gene: 30061974
Following gene: 30061977
Centisome position: 9.44
GC content: 54.31
Gene sequence:
>963_bases ATGCGTCAGACTAAAACCGGTATCCTGCTGGCAAACCTGGGTACGCCCGATGCCCCCACACCTGAAGCGGTAAAACGCTA TCTGAAACAATTTTTAAGCGACAGACGCGTGGTTGATACCTCACGGTTGTTATGGTGGCCGTTGCTGCGCGGCGTGATTT TGCCGCTGCGCTCGCCGCGTGTGGCGAAGCTGTACGCCTCTGTCTGGATGGAAGACGGCTCGCCGCTGATGGTTTACAGC CGCCAGCAACAGCAGGCGTTGGCACAACGTTTACCGGATACGCCAGTGGCGCTGGGCATGAGCTACGGCTCGCCATCACT GGAAAGCTCCGTCGATGAACTCCTGGCAGAGCATGTAGATCATATTGTGGTGCTGCCGCTTTATCCGCAATTCTCCTGTT CTACGGTCGGTGCGGTATGGGATGAACTGGCACGCATTCTGGCGCGCAAACGTAGCATTCCGGGGATATCGTTTATTCGT GATTACGCCGATAACCACGATTACATTAATGCACTGGCGAACAGCGTACGCGCTTCTTTTGCCAAACATGGCGAACCGGA TCTGCTGCTGCTCTCTTATCATGGCATTCCCCAGCGTTATGCAGATGAAGGCGATGATTACCCGCAACGTTGCCGCACAA CGACTCGCGAACTGGCTTCCGCACTGGGGATGGTACCGGAAAAAGTGATGATGACCTTTCAGTCGCGCTTTGGCCGGGAA CCCTGGCTGATGCCTTATACCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATACAGGTGATGTGCCC GGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCGGGCGGGA AAAAATATGAATATATTCCAGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGC TAA
Upstream 100 bases:
>100_bases TCTGCTTATCCACCTCAGGCAATACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAAGT TGAATCGATAAGAGGCGGTA
Downstream 100 bases:
>100_bases AGCTGAGCGGTAAAGAACTGAGCGCCGTCGCGAAGAGCCTCGTCGGCGGTTTTCATCATCCGTGAATAATGCAAAAAGGC ATGCAGCGTACCTGGGTAGA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEDGSPLMVYS RQQQQALAQRLPDTPVALGMSYGSPSLESSVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMVPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
Sequences:
>Translated_320_residues MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEDGSPLMVYS RQQQQALAQRLPDTPVALGMSYGSPSLESSVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMVPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR >Mature_320_residues MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEDGSPLMVYS RQQQQALAQRLPDTPVALGMSYGSPSLESSVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMVPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=334, Percent_Identity=26.0479041916168, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI60499021, Length=333, Percent_Identity=26.1261261261261, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1786681, Length=320, Percent_Identity=98.4375, Blast_Score=653, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6324750, Length=338, Percent_Identity=27.2189349112426, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI17864156, Length=336, Percent_Identity=25.8928571428571, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24651774, Length=269, Percent_Identity=26.7657992565056, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35943; Mature: 35943
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH VAKLYASVWMEDGSPLMVYSRQQQQALAQRLPDTPVALGMSYGSPSLESSVDELLAEHVD HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC HIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASF CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH AKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMVPEKVMMTFQSRFGRE HHCCCCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIP CCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEC ALNATPEHIEMMANLVAAYR CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH VAKLYASVWMEDGSPLMVYSRQQQQALAQRLPDTPVALGMSYGSPSLESSVDELLAEHVD HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC HIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASF CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH AKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMVPEKVMMTFQSRFGRE HHCCCCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIP CCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEC ALNATPEHIEMMANLVAAYR CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA