Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

Click here to switch to the map view.

The map label for this gene is pgpA

Identifier: 30061913

GI number: 30061913

Start: 365221

End: 365739

Strand: Direct

Name: pgpA

Synonym: S0363

Alternate gene names: 30061913

Gene position: 365221-365739 (Clockwise)

Preceding gene: 30061912

Following gene: 30061917

Centisome position: 7.94

GC content: 52.79

Gene sequence:

>519_bases
ATGACCATTTTGTCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTGCTTGCTGTCGG
ATTCGGAAGTGGATTAAGCCCAATCGTTCCTGGCTCGATGGGATCGCTGGCGGCGATCCCTTTCTGGTATCTGATGACCT
TTTTACCCTGGCAGCTCTACTCGCTGGTGGTGATGTTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAA
GATATGGGCGTGCACGATCACGGCAGCATTGTCTGGGACGAATTTATTGGTATGTGGATCACGCTCATGGCGCTGCCGAC
CAATGACTGGCAGTGGGTTGCCGCCGGGTTTGTGATTTTCCGTATTCTGGATATGTGGAAGCCGTGGCCGATCCGCTGGT
TTGATCGCAATGTACATGGCGGCATGGGGATCATGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTAC
TTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAG

Upstream 100 bases:

>100_bases
CTTGGCGTACCGTTTACCTGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGT
CACGTTTGACTGGAAAGGAT

Downstream 100 bases:

>100_bases
TTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACCGCATGCGG
TTTATACGGCGTTTCCAGCT

Product: phosphatidylglycerophosphatase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAK
DMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
FIGHHWPLGILS

Sequences:

>Translated_172_residues
MTILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAK
DMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
FIGHHWPLGILS
>Mature_171_residues
TILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKD
MGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYF
IGHHWPLGILS

Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=172, Percent_Identity=98.8372093023256, Blast_Score=341, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 19394; Mature: 19263

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLAAIPFWYLMTFLPWQLY
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS
HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLAAIPFWYLMTFLPWQLY
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS
HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2846510; 9278503 [H]