| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is malZ
Identifier: 30061899
GI number: 30061899
Start: 351157
End: 352974
Strand: Direct
Name: malZ
Synonym: S0348
Alternate gene names: 30061899
Gene position: 351157-352974 (Clockwise)
Preceding gene: 30061898
Following gene: 30061900
Centisome position: 7.63
GC content: 54.35
Gene sequence:
>1818_bases ATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACTGCTCATTACACTGTGGCT GACGGGCGAAGACCCACCGCAGCGCATTATGCTGCGTACAGAACACGATAACGAAGAAATGTCAGTACCAATGCATAAGC AGCGCAGTCAGCCGCAGCCAGGCGTCACCGCATGGCGTGCGGCGATTGATCTCTCCAGCGGACAACCCCGGCGGCGTTAC AGTTTCAAACTGCTGTGGCACGATCGCCAGCGTTGGTTTACACCGCAGGGCTTCAGCCGAATGCCGCCGGCACGACTGGA GCAGTTTGCCGTCGATGTACCTGATATCGGCCCACAATGGGCTGCGGATCAGATTTTTTATCAGATCTTCCCTGATCGTT TTGCGCGTAGTCTTCCTCGTGAAGCTGAACAGGATCATGTCTATTACCATCATGCAGCCGGACAAGAGATCATCTTGCGT GACTGGGATGAACCGGTCACGGCGCAGGCGGGCGGATCAACGTTCTATGGCGGCGATCTGGACGGGATAAGCGAAAAACT GCCGTATCTGAAAAAGCTTGGCGTGACAGCGCTGTATCTCAATCCGGTGTTTAAAGCTCCCAGCGTACATAAATACGATA CCGAGGATTATCGCCATGTCGATCCGCAGTTTGGCGGTGATGGGGCGTTGCTGCGTTTGCGACACAATACGCAGCAGCTG GGAATGCGGCTGGTGCTGGACGGCGTGTTTAACCACAGTGGCGATTCCCATGCCTGGTTTGACAGGCACAATCTTGGCAC GGGGGGAGCTTGTCACAACTCTGAATCGCCCTGGCGCGACTGGTACTCGTTTAGTGATGATGGCACGGCGCTCGACTGGC TTGGCTATGCCAGCTTGACGAAGCTGGATTATCAGTCGGAAAGTCTGGTGAATGAAATTTATCGCGGGGAAGACAGTATT GTCCGCCACTGGCTGAAAGCGCCGTGGAATATGGACGGCTGGCGGCTGGATGTGGTGCATATGCTGGGGGAGGCGGGTGG GGCGCGCAATAATATGCAGCACGTTGCCGGGATCACCGAAGCGGCGAAAGAAACCCAGCCGGAAGCGTATATTGTCGGCG AACATTTTGGCGATGCACGGCAATGGTTACAGGCCGATGTGGAAGATGCTGCCATGAACTATCGTGGCTTCACATTCCCG TTGTGGGGATTTCTTGCCAATACCGACATCTCTTATGATCCGCAGCAAATTGACGCCCAAACCTGTATGGCCTGGATGGA TAATTACCGCGCAGGGCTTTCTCATCAACAACAATTACGTATGTTTAATCAGCTCGATAGCCACGATACTGCGCGATTTA AAACGCTGCTCGGTCGGGATATTGCGCGCCTGCCGCTGGCGGTGGTCTGGCTGTTCACCTGGCCTGGTGTACCGTGCATT TATTACGGTGATGAAGTGGGACTGGATGGTAAAAACGATCCGTTTTGCCGTAAACCGTTCCCCTGGCAGGTGGAAAAGCA GGATACGGCGTTATTCGCGCTGTACCGGCGAATGATTGTGCTGCGTAAGAAAAGTCAGGCGCTGCGTCGTGGCGGCTGTC AGGTGCTGTATGCGGAAGATAACGTAGTGGTATTTGTCCGCGTGCTGAATCAGCAACGTGTACTGGTGGCAATCAACCGT GGCGAGGCCAGTGAAGTGGTGCTACCCGCGTCACCGTTTCTCAATGCCGTGCAATGGCAATGCAAAGAAGGGCATGGGCA ACTGACTGACGGGATTCTGGCTTTGCCTGCCATTTCGGCTACGGTATGGATGAACTAA
Upstream 100 bases:
>100_bases GTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAG ATTTTCATCACAGGGGAATT
Downstream 100 bases:
>100_bases CGTTTTATAACGCCTTGTGTGACGCCTGCGCCATCATCCGCGGATAAAACTGCCAGAAGCGGGTTTCGAGGGCGTCATAA TGAGCGTCTAAATCGTACCA
Product: maltodextrin glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRY SFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQL GMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSESPWRDWYSFSDDGTALDWLGYASLTKLDYQSESLVNEIYRGEDSI VRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFP LWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCI YYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYRRMIVLRKKSQALRRGGCQVLYAEDNVVVFVRVLNQQRVLVAINR GEASEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
Sequences:
>Translated_605_residues MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRY SFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQL GMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSESPWRDWYSFSDDGTALDWLGYASLTKLDYQSESLVNEIYRGEDSI VRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFP LWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCI YYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYRRMIVLRKKSQALRRGGCQVLYAEDNVVVFVRVLNQQRVLVAINR GEASEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN >Mature_605_residues MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRY SFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQL GMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSESPWRDWYSFSDDGTALDWLGYASLTKLDYQSESLVNEIYRGEDSI VRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFP LWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCI YYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYRRMIVLRKKSQALRRGGCQVLYAEDNVVVFVRVLNQQRVLVAINR GEASEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
Specific function: May play a role in regulating the intracellular level of maltotriose. Cleaves glucose from the reducing end of maltotriose and longer maltodextrins with a chain length of up to 7 glucose units [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI1786604, Length=605, Percent_Identity=98.8429752066116, Blast_Score=1242, Evalue=0.0, Organism=Escherichia coli, GI1789995, Length=519, Percent_Identity=25.0481695568401, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790687, Length=188, Percent_Identity=32.4468085106383, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6322245, Length=194, Percent_Identity=27.8350515463918, Blast_Score=74, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6321726, Length=265, Percent_Identity=23.7735849056604, Blast_Score=74, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6324416, Length=201, Percent_Identity=25.8706467661692, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322241, Length=201, Percent_Identity=25.8706467661692, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322021, Length=201, Percent_Identity=25.8706467661692, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321731, Length=172, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319776, Length=172, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24586599, Length=505, Percent_Identity=24.5544554455446, Blast_Score=93, Evalue=7e-19, Organism=Drosophila melanogaster, GI24586593, Length=500, Percent_Identity=23.8, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24586589, Length=370, Percent_Identity=25.1351351351351, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24586591, Length=372, Percent_Identity=26.6129032258064, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24586597, Length=502, Percent_Identity=23.3067729083665, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45549022, Length=197, Percent_Identity=27.9187817258883, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24583747, Length=86, Percent_Identity=41.8604651162791, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI24583749, Length=86, Percent_Identity=41.8604651162791, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI24586587, Length=110, Percent_Identity=36.3636363636364, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24583745, Length=84, Percent_Identity=36.9047619047619, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI221330053, Length=492, Percent_Identity=21.7479674796748, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR017069 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 69183; Mature: 69183
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQP CCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCC GVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQW CHHHHHHEEECCCCCCCCEEEEEEEEECCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCH AADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCC DGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQL CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH GMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSESPWRDWYSFSDDGTALDWLGYASLT HHHHEEHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHCCHHHH KLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITE HCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHH AAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQ HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHH TCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCI HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE YYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYRRMIVLRKKSQALRRGGCQVLYAED EECCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC NVVVFVRVLNQQRVLVAINRGEASEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISA CEEEEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEECCHHEE TVWMN EEECC >Mature Secondary Structure MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQP CCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCC GVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQW CHHHHHHEEECCCCCCCCEEEEEEEEECCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCH AADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCC DGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQL CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH GMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSESPWRDWYSFSDDGTALDWLGYASLT HHHHEEHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHCCHHHH KLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITE HCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHH AAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQ HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHH TCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCI HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE YYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYRRMIVLRKKSQALRRGGCQVLYAED EECCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC NVVVFVRVLNQQRVLVAINRGEASEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISA CEEEEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEECCHHEE TVWMN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1918057; 9278503; 1706703 [H]