| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is rhsG
Identifier: 30061832
GI number: 30061832
Start: 282704
End: 284917
Strand: Direct
Name: rhsG
Synonym: S0284
Alternate gene names: NA
Gene position: 282704-284917 (Clockwise)
Preceding gene: 30061831
Following gene: 30061833
Centisome position: 6.15
GC content: 54.11
Gene sequence:
>2214_bases ATGAGTTTTGTATCTACGGGTAATAAACCAGTTGGAAACGGTGGACCCGTCATCACCACACCACCAATAGCTGGCGAAAG TGGCGGTATGAGCACAGGTTCAGCTGTAACCGATGTATCTGGTGCCGCCGAGGAGATGGCAGAACAGGCTGCGGCGGACC TGTTTGGTGCGCTGCCGGAACCGTCAGGTCTGGTTAAAGCCGCAGTAGCTGCTGCGCAGGCTGCCGCTGCAGCAGCAGGG ATCTCGGATATGGCTGGTGCAGTTCAGGATGCAGCGGCGTCGCTTGCAGCCGGTGCTCCGGGGGCGCATAACGTCACAGT AAGTGGTAGTGCGGTGCCGCCGCAGATGCTTTTGTTTGCAGGCATGAATGGTTCGGAAGGGCTTGGGAATCTGTTTTCTT ACACAGTACAGCTTAAAACGCTGGACGCCCTGAACCTGGGGTACGTTTCCCCCGCTGCTAACCTGCCGCTTCAGCTCATG GTGGGCAAAGACCTGTGCGTCAGTATCGAACTGGACGGCGGCGGAAAACGGTATATCAGCGGGCTGGTGACGGCGGCGAG GGTGGTCGGCCATGAGAGCCGTTCGGTAACGTATGAATTACGCATTGAGCCATGGCTGAAGCTGCTGACCCATACCAGCG ACTACAAAGCGTTCCAGAACAAAACCGTGGTGGATATTCTCGATGAAGTACTGGATGAATATTCCTTTCCGGTGGAAAAG CGGCTGGTGGAAAATTATCCACCCCGCGCCTGGCAGGTGCAGTATGGTGAAACCGACTTCGATTTCATCCAGCGCCTGAT GCAGGAATGGGGGATTTACTGGTGGTTTGAGCACAGCGAGAACAGCCACACGCTGGTGCTGGTGGATGCCATCAATGGTC ATAAAGCGTGCCCTGACTCGCCGCTGGTGGAGTGGCACCAGGAAGGGCTGAAACTGGATAAGGAATTTATCCACACCATT ACGGCCAGTGAGAGGCTGCGTACTGGAAAGTGGGTGATGGACGATTTTGATTTTATGAAGCCTCGTTCGCTGCTTAAAAG TACCGTGGCCAGTCCGCGTGATACCGGTCATGCTGAATACGAGCATTACGAATGGCCTGGTGATTACTTCACTACGGGCG AAGGCGAGATGCTGACGCGCATTCGTATGGAAGCGCAGCGCAGCCCAGGCAGCCGGGCACATGGGGCCGGTCATATCCGT ACCCTCATGACCGGGTACACCTTTACGTTGATGAATCACCCGACGGCAGAAATTAATCAGGAATATCTGCTGGTACAGAC CACTCTGTTTTTACGGGATAATGCGCAGCACAGCGGTCAGGATCAGCATTTTACCTATGTCACCACGTTTGAACTGCACC CCACCAGCGAAGTTTACCGCCCACAACGAACCCTGAGCAAACCCCACACCAAAGGCCCGCAGAGCGCCATCGTCACCGGC CCGGCGGGGCAGGAAATCTGGACGGATAAATATGGCCGGGTGAAGGTGCAGTTTGGCTGGGACCGTTACGGAAAGAATGA CGAAAACAGTTCCTGCTGGATCCGCGTCAGCTATCCGTGGGCGGGTAAAGGATTCGGCATGATCCAGATCCCGCGTATTG GCCAGGAAGTACTGGTGGATTTCAAAAACGGCGATCCGGATTTGCCCATCATCGTGGGGCGCACCTATAACCAGGACACC ATGCCGCCGTGGGGGCTGCCGGGCATGGCGTCGCAGAGTGGGATATTCAGCCACTCATTGCAGGGAGGGCCGACTAACGG AAATATGCTGCGCTTCGATGATAAAACGGGTGCGGAAGAGGTGAAGTTCCATGCGGAAAAAGACCTCAATACCACGGTAA AAAACAATGAAACCCACACGGTCATGGTCGATCGCATAAAAACCATTGTCAAAAATGAAACCATCAGCGTGGGAGAAGAC CGTAATGCCACCATCACAAAAAATGATGGTCTTTCCGTCAAACTGGCTCAAACCATCAATGTCGGAACGACATATCGTCT GGATGTTGGCGATCAATTTACCCTTCGTTGCGGCAATGCAGCGCTTGTATTACACAAGGATGGCTCGATTGAGTTTTGCG GAAAACAACTGTTACTGCACACCAGCGATGTTATGCAACTCATTGGCAGTGGCATTGATATGAATCCGGATGGCGGCACA GCCATGACTGCGGATGATATTGCCCCGTTACCTACCCCCGACGTTTCTGAATAA
Upstream 100 bases:
>100_bases ATGTTGGTTTCATTATAAAGACGGGCAATGGAGAGTGATTACTTATATTTTTTGGCCACCAGGGGCTAGATTTTAATCCG GTATTAAAGGAGCAAATATC
Downstream 100 bases:
>100_bases AAAATATAAAAGGAATTTTTCTATGACCAGCCTTTACCGTATTCAGGAGGGCTGCTTTGCCCTGCCTGAAACTTTTCTTG ATCGCACCGTCAATATCTTC
Product: putative Rhs-family protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAG ISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLM VGKDLCVSIELDGGGKRYISGLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTI TASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIR TLMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDT MPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGED RNATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT AMTADDIAPLPTPDVSE
Sequences:
>Translated_737_residues MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAG ISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLM VGKDLCVSIELDGGGKRYISGLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTI TASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIR TLMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDT MPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGED RNATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT AMTADDIAPLPTPDVSE >Mature_736_residues SFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAGI SDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMV GKDLCVSIELDGGGKRYISGLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEKR LVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTIT ASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRT LMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTGP AGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTM PPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDR NATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGTA MTADDIAPLPTPDVSE
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80330; Mature: 80199
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPE CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCC PSGLVKAAVAAAQAAAAAAGISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEE GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHH GLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK HHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCHHH RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS HHHHCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCC PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEECCHHHCCHHHHHHHHHCCCCCCCCCCC EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ CCEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEECCCHHHCCC EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG CEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHHCCCCCCCCCCEEEEC PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD CCCCCHHCCCCCEEEEEECHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEE FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE ECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCHHH VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN HEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEECCCCCCCEEEECCCCEEEEEEEEC VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT CCEEEEEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCC AMTADDIAPLPTPDVSE EEECCCCCCCCCCCCCC >Mature Secondary Structure SFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPE CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCC PSGLVKAAVAAAQAAAAAAGISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEE GMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLMVGKDLCVSIELDGGGKRYIS CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHH GLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK HHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCHHH RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDS HHHHCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCC PLVEWHQEGLKLDKEFIHTITASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEY HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEECCHHHCCHHHHHHHHHCCCCCCCCCCC EHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIRTLMTGYTFTLMNHPTAEINQ CCEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEECCCHHHCCC EYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG CEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHHCCCCCCCCCCEEEEC PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVD CCCCCHHCCCCCEEEEEECHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEE FKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEE ECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCHHH VKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGEDRNATITKNDGLSVKLAQTIN HEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEECCCCCCCEEEECCCCEEEEEEEEC VGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT CCEEEEEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCC AMTADDIAPLPTPDVSE EEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA