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The map label for this gene is insO2 [H]

Identifier: 30061779

GI number: 30061779

Start: 236983

End: 237822

Strand: Direct

Name: insO2 [H]

Synonym: S0224

Alternate gene names: 30061779

Gene position: 236983-237822 (Clockwise)

Preceding gene: 30061778

Following gene: 30061784

Centisome position: 5.15

GC content: 54.29

Gene sequence:

>840_bases
GTGGTCACACTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCCTGAAAAACCAGACGG
CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCACGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGT
CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGT
GACCGAACCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTC
TCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAA
ATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAAC
GCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCAAGGCAGCTCACGCCATAACG
GACTATATCGTTGGATATTACAGTGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCG
ATACTGGAAAAACTCTAACTCGGTGGCCAGTTTTTGTTGA

Upstream 100 bases:

>100_bases
TTGAAATGGAGAATGAAATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGA
AACTCAGAGCGCATTATCCT

Downstream 100 bases:

>100_bases
CCACTTCATCTTTACCTTTGTTGCAATAAAAAGCCCCGCGAATGCGAGGCTAAATCCTGGTGTTTGTGATGACTGGCTCT
TATCTAAACGCAGCCCCTTA

Product: IS911 orfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSKAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC

Sequences:

>Translated_279_residues
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSKAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
>Mature_279_residues
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSKAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC

Specific function: Involved in the transposition of the insertion sequence IS911B [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=245, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=4e-24,
Organism=Escherichia coli, GI1788405, Length=271, Percent_Identity=32.4723247232472, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787263, Length=271, Percent_Identity=32.4723247232472, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786753, Length=271, Percent_Identity=32.4723247232472, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786570, Length=271, Percent_Identity=32.4723247232472, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786490, Length=271, Percent_Identity=32.4723247232472, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1789981, Length=261, Percent_Identity=32.183908045977, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32338; Mature: 32338

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHEECCCCCCEEECCEEE
IWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGS
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
HYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSKAAHAIT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHEECCCCCCEEECCEEE
IWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGS
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
HYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSKAAHAIT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]