| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350149
Identifier: 29350149
GI number: 29350149
Start: 6220589
End: 6221977
Strand: Reverse
Name: 29350149
Synonym: BT_4741
Alternate gene names: NA
Gene position: 6221977-6220589 (Counterclockwise)
Preceding gene: 29350150
Following gene: 29350148
Centisome position: 99.39
GC content: 30.89
Gene sequence:
>1389_bases ATGGTTACAATATATTTGGATAAACAAGTTTTCAGTCATCTATTTAATGCAAAAGAAGAAAAGTATTCTCTTTTGCGTGA AAAGATATTATCTCACAAAGATGAGTTTATTTTCTTCTACTCAAATGCTCATTTATTTGATTTGCAAGATGATAAAACGG ATATTAAATATACTGAAATGGAATATATGCAATCGATAGTAAGTGGATATCATTTAATATACGAAAACCATAAACAGGAA GTTATAAAGCAATCCCCACGCAATGCTTTCGAAACTATAGGCAAAATAGAGGATTTCTCTTGGCTTGAAAATTTTGATTT TTCACAAATAACAGAAGAACAGCGGAATGTTATCAATAACATTGTTGATATTAGCATTAAGGATTTAAAAGGTGAATTAG ATTTTGATTGGCTAAAAAAAAGAGCCCCAATTTCAGTCGATGAACTCCAAATGGACATATCAACTTTTACATCATTAATG AAATTCGTCTCCCACTATTTTTATGAGAATAAGGAGTCATACAAAATTATGAGAGACAATACTATTGCTAGATATAATCC GACATCAATTAAAGCGGAAGGTGAAAATGTTTTTAACGAGCAGTTAGCCTCATCTCCATTAGGATTATCCTTTCTAGATA TTATTCAAGCCTCTTTAACTCAAACAGGATTATCATACACTGATTTTGCAACGGTATATTATATGTCATATATACTTCTT GATCTATTTGGAGTTAATAAAGAAACCCGGAAGAAGGTTAAGTTTAGAAATATGCAAGTCGACTGTTACCACAGTTTCTT CGGCTCATACTGCGATTGCATGGTTAGTGATGACGAAGGTATGCGCCTCAAGAGCAAAACATTATACAAACTTTTCAATT TCAACACTAAAGTATATTCAATAGATGAGTTTATAGAAAAATTTGATGAAGCAATAAATAACAATAAAAAATCTGCGCGT GAATATTTTGATGAAGTTCTTAGCGATTATATTACAAGGCAAGTAACTAGAGTCGAAACAAAATCTGGGCAATTTTTAAC TTATCTGAGTACTTCTTATAAATACTTCGGATATTTTAACTGCATGATAGAAAGAAAATCAAAAGATGAGACGGTTATTA TACTCCATAAGAACAACGACTTGAAGCAACCTATTCTGGCGAAAGAATTAGAGATTATAACTAATAGGATTGTTAGAGTG TTTAATGATATGGGAGCTACCTTTACTTTATTCGATGAAGCAGTAGAAATCCCTCTATTAAAAGCTGACAATTGGAATAG ATTTCTAACGTTAAATGATGCTGATGTGTGTTTAACTAAATTCAAAGATACACCTATGTTGTGTTTATGGATTAAGTTAA AGCAGCCAATATTACAAAATAAAAATTGA
Upstream 100 bases:
>100_bases AAGACAAAGAAGATTAAAAAAATCTTCCAGAAATACAACGAAAAGGTTTAGTATTGAAGAAGGTAAAAACAACAAACAAA TCGTTATTATTTTACAATTT
Downstream 100 bases:
>100_bases AGAAATTAAAGATTCCTGCAACAAGCCACTGACGAGGATATAGTGGTTTCCGATTTGTGTCTGCTCGCTAGTATGTATCA ACTTGTTGCGTTGAATACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN
Sequences:
>Translated_462_residues MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN >Mature_462_residues MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEMEYMQSIVSGYHLIYENHKQE VIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINNIVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLM KFVSHYFYENKESYKIMRDNTIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYSIDEFIEKFDEAINNNKKSAR EYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFNCMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRV FNDMGATFTLFDEAVEIPLLKADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54578; Mature: 54578
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEM CEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHH EYMQSIVSGYHLIYENHKQEVIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHH IVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLMKFVSHYFYENKESYKIMRDN HHCEEEHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC TIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL EEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYS HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHCCCCEEEE IDEFIEKFDEAINNNKKSAREYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEEE CMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRVFNDMGATFTLFDEAVEIPLL EEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEE KADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN ECCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHHHCCCC >Mature Secondary Structure MVTIYLDKQVFSHLFNAKEEKYSLLREKILSHKDEFIFFYSNAHLFDLQDDKTDIKYTEM CEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHH EYMQSIVSGYHLIYENHKQEVIKQSPRNAFETIGKIEDFSWLENFDFSQITEEQRNVINN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHH IVDISIKDLKGELDFDWLKKRAPISVDELQMDISTFTSLMKFVSHYFYENKESYKIMRDN HHCEEEHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC TIARYNPTSIKAEGENVFNEQLASSPLGLSFLDIIQASLTQTGLSYTDFATVYYMSYILL EEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DLFGVNKETRKKVKFRNMQVDCYHSFFGSYCDCMVSDDEGMRLKSKTLYKLFNFNTKVYS HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHCCCCEEEE IDEFIEKFDEAINNNKKSAREYFDEVLSDYITRQVTRVETKSGQFLTYLSTSYKYFGYFN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEEE CMIERKSKDETVIILHKNNDLKQPILAKELEIITNRIVRVFNDMGATFTLFDEAVEIPLL EEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEE KADNWNRFLTLNDADVCLTKFKDTPMLCLWIKLKQPILQNKN ECCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA