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The map label for this gene is ynaI [C]

Identifier: 29350096

GI number: 29350096

Start: 6149376

End: 6150440

Strand: Reverse

Name: ynaI [C]

Synonym: BT_4688

Alternate gene names: 29350096

Gene position: 6150440-6149376 (Counterclockwise)

Preceding gene: 29350097

Following gene: 29350095

Centisome position: 98.24

GC content: 37.84

Gene sequence:

>1065_bases
ATGTTAGAAAATGAATTATGGGGAAATACTATTGAAAACTGGGGTATTTCCATTCTTATTATTTTAGGAGCAATTATTAT
TGTGAAATTATTATCGCTATTAGGCAAGAAAGTTATCAAACCTTTTGTTACGGGAACCGACAATCACCTGGACGACGTCA
TTTTTTACTCTTTGGAAGCGCCTGTTAAGTTTGCTATAATTCTGTTGGGAATCTGGATCGCTATCCATCGGTTGGTTTAT
CCGGACAGTTTTGTGAAAGTAGTTGACAATGCTTACAGCATTTTGATTGTTCTGGATATTACTTGGTTTTTCGGCCGTTT
GTTCAGTAGTTTACTTCAGGTTTACTGGGGAAAGCAGTCCAACGGACAAGCTAACAAAATGATGCCAATCATCAAAAGAA
CCATCTTGGTTATAGTCTGGCTCATCGGCATCGTCATGGCTTTGAGTAATGTGGGAGTTAACATCAGCGCTCTGTTGGGA
ACTTTGGGTATTGGTGGTATCGCATTTGCTTTGGCAGCACAAGATACAGTAAAAAACGTTTTCGGTGCGTTTACCATTCT
GACGGATAAACCTTTCAGCATCGGAGACACAATTCGCGTGGATAGTTATGAAGGAACGGTAGTAGACGTAGGAGTCCGAA
GCACAAAAATAATGAATTACGACAAACGTATTATAACTTTCCCCAATTATAAGATTACCGATACTTCTATCGTTAATATT
TCATCCGAACCTATGCGCCGAGTAGTCTTGAATCTTGGACTGACGTATGATACGACTTCCGAAAAGATGAAAGAAGCTTT
AGAACTATTGAAATCCATCCCCAAAAGAGTAGAAAATGTATCTTCTAACCCTTCTGATATAGTCGCTGTTTTTACAGAAT
ACTCAGATTCCGCATTGGTTATCATGTATATCTATTTTATAGAAAAACAAGGAGATATTTTAGGCGTAACCTCAAATATG
AATATGGAAATACTGGCTGCTTTTAATAAAGCAGGATTGAACCTTGCTTTTCCGACACGGACTGTCTATATTCAGAAAGA
CGAATCATTGAAACAAGAAAATTGA

Upstream 100 bases:

>100_bases
TTTCTATCACAGCATCTTCAGCTCTTATCTTGTATCGTCAATAAAAAGGAGATCAACTTGATATTATTAAATAAAAGTAC
AATTATAAATCAGTTAGACT

Downstream 100 bases:

>100_bases
TAAACCCATCGTTCTCTTAGAAATATGTACATGCAGCCCAACATCAATGTGCTATTTTTAAGATTAAACAAAAATACAGT
TGAGATAAAAATGATAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLENELWGNTIENWGISILIILGAIIIVKLLSLLGKKVIKPFVTGTDNHLDDVIFYSLEAPVKFAIILLGIWIAIHRLVY
PDSFVKVVDNAYSILIVLDITWFFGRLFSSLLQVYWGKQSNGQANKMMPIIKRTILVIVWLIGIVMALSNVGVNISALLG
TLGIGGIAFALAAQDTVKNVFGAFTILTDKPFSIGDTIRVDSYEGTVVDVGVRSTKIMNYDKRIITFPNYKITDTSIVNI
SSEPMRRVVLNLGLTYDTTSEKMKEALELLKSIPKRVENVSSNPSDIVAVFTEYSDSALVIMYIYFIEKQGDILGVTSNM
NMEILAAFNKAGLNLAFPTRTVYIQKDESLKQEN

Sequences:

>Translated_354_residues
MLENELWGNTIENWGISILIILGAIIIVKLLSLLGKKVIKPFVTGTDNHLDDVIFYSLEAPVKFAIILLGIWIAIHRLVY
PDSFVKVVDNAYSILIVLDITWFFGRLFSSLLQVYWGKQSNGQANKMMPIIKRTILVIVWLIGIVMALSNVGVNISALLG
TLGIGGIAFALAAQDTVKNVFGAFTILTDKPFSIGDTIRVDSYEGTVVDVGVRSTKIMNYDKRIITFPNYKITDTSIVNI
SSEPMRRVVLNLGLTYDTTSEKMKEALELLKSIPKRVENVSSNPSDIVAVFTEYSDSALVIMYIYFIEKQGDILGVTSNM
NMEILAAFNKAGLNLAFPTRTVYIQKDESLKQEN
>Mature_354_residues
MLENELWGNTIENWGISILIILGAIIIVKLLSLLGKKVIKPFVTGTDNHLDDVIFYSLEAPVKFAIILLGIWIAIHRLVY
PDSFVKVVDNAYSILIVLDITWFFGRLFSSLLQVYWGKQSNGQANKMMPIIKRTILVIVWLIGIVMALSNVGVNISALLG
TLGIGGIAFALAAQDTVKNVFGAFTILTDKPFSIGDTIRVDSYEGTVVDVGVRSTKIMNYDKRIITFPNYKITDTSIVNI
SSEPMRRVVLNLGLTYDTTSEKMKEALELLKSIPKRVENVSSNPSDIVAVFTEYSDSALVIMYIYFIEKQGDILGVTSNM
NMEILAAFNKAGLNLAFPTRTVYIQKDESLKQEN

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=231, Percent_Identity=30.3030303030303, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367355, Length=202, Percent_Identity=27.7227722772277, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1789291, Length=203, Percent_Identity=26.1083743842365, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786670, Length=251, Percent_Identity=23.9043824701195, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 39375; Mature: 39375

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENELWGNTIENWGISILIILGAIIIVKLLSLLGKKVIKPFVTGTDNHLDDVIFYSLEA
CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PVKFAIILLGIWIAIHRLVYPDSFVKVVDNAYSILIVLDITWFFGRLFSSLLQVYWGKQS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCC
NGQANKMMPIIKRTILVIVWLIGIVMALSNVGVNISALLGTLGIGGIAFALAAQDTVKNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH
FGAFTILTDKPFSIGDTIRVDSYEGTVVDVGVRSTKIMNYDKRIITFPNYKITDTSIVNI
HHHEEEEECCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEECCCEEEEC
SSEPMRRVVLNLGLTYDTTSEKMKEALELLKSIPKRVENVSSNPSDIVAVFTEYSDSALV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
IMYIYFIEKQGDILGVTSNMNMEILAAFNKAGLNLAFPTRTVYIQKDESLKQEN
EEEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MLENELWGNTIENWGISILIILGAIIIVKLLSLLGKKVIKPFVTGTDNHLDDVIFYSLEA
CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PVKFAIILLGIWIAIHRLVYPDSFVKVVDNAYSILIVLDITWFFGRLFSSLLQVYWGKQS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCC
NGQANKMMPIIKRTILVIVWLIGIVMALSNVGVNISALLGTLGIGGIAFALAAQDTVKNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH
FGAFTILTDKPFSIGDTIRVDSYEGTVVDVGVRSTKIMNYDKRIITFPNYKITDTSIVNI
HHHEEEEECCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEECCCEEEEC
SSEPMRRVVLNLGLTYDTTSEKMKEALELLKSIPKRVENVSSNPSDIVAVFTEYSDSALV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
IMYIYFIEKQGDILGVTSNMNMEILAAFNKAGLNLAFPTRTVYIQKDESLKQEN
EEEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]