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The map label for this gene is 29350070

Identifier: 29350070

GI number: 29350070

Start: 6104875

End: 6106983

Strand: Reverse

Name: 29350070

Synonym: BT_4662

Alternate gene names: NA

Gene position: 6106983-6104875 (Counterclockwise)

Preceding gene: 29350071

Following gene: 29350069

Centisome position: 97.55

GC content: 39.54

Gene sequence:

>2109_bases
ATGAAGAACATCTTCTTTATTTGCTTTTGTGCGCTATTCGCATTTAGTGGATGCGCAGACGATGATGATGATCTATTAAC
CGGAGGGAATGTAGATATAGATCTGCTTCCTGATGCCAAACCAAACGATGTTGTTGATCCTCAAGTATTCGAGGCTATCA
ACCTCAACTACCCCGGTCTGGAAAAAGTTAAAGAATTCTACGAGGCAGGCGAACATTATTATGCAGCCAATGCTTTATTG
GAATACTATAGAACGAGAACCAATGTTACAAATCCGAACTTATCTTTAATTAATGTGACGATCTCAGAAGCAGAGCAGGC
AAAAGCTGATTATGCACTGGTAGATTATCGCTTTCATGTTAACAACTTCTATGAAGATAAGGAAACCCTGAAACCCTATT
CAGTAAAACAAGACGGAGGTATAAACTGGGAGTATTCACCGAAAGATGCATCTGATGAATATCAGAAACAACTTCATCGC
CATCAGTGGTTCATCCCCCAAGCCAAAGCTTACCGTGTAAGTGGAGATGAGAAATACATTCAATCATGGATTGAGGTATA
TAAGAATTGGATAGAAAACAATCCGAAGCCTACAACAGGACCTAATACTACCTCATGGTGGCAGTTACAGGTATCTACCC
GTATCGGTGACCAAGTACAATTGCTTGAATACTTCAAGAACTCTGTTAATTTTACTCCGGAATGGCTTTCTACATTCTTG
GTAGAATTTGCAGAACAAGCAGACTTTCTCGTAGATTATCCGTATGAATCAGGAGGTAACATACTTATATCACAAGCGAA
TGCATTGGCTACTGCCGGAACGTTAATGCCGGAATTTAAGAATGCGGAGAAATGGATGAATACAGGATATCAGATACTTA
GCGAAGAAGTACAAAATCAAATTATGAGTGACGGATGGCACAAGGAAATGTCGCTCCACTATCATATCGGTATCGTTGCG
GATTTCTACGAGGCAATGAAATTAGCAGAGGCAAACCAACTCTCCAGTAAATTGCCGTCAGATTTTACAGAACCACTGCG
TAAAGCAGCAGAAGTAGTGATGTACTTCACATATCCTAATTACTTTATCAAGGGTTCCGATAATGTGGTCCCAATGTTCA
ACGACTCATGGAGCCGGACACGTAATGTCCTTAAAAATACGAACTTTAAGCAATATGTGGAAATGTTCCCGGATAGTGAA
GAATTGAAATATATGCAAACTGCCGGAAATGGTGGAACAGCACAGGGACGTACCCCCAATAATGATATGAAGCTATTCGA
CCAGGCAGGATATTATGTATTACGAAATGGTTGGACACCGGCTTCTACAGTCATGATTTTAAGCAATAACAAGAGTAATG
ATGCTTCTAATTCACTTAGTGCTTATAGTCATAACCAGCCAGATAATGGAACTTTCGAACTTTACCATAACGGACGAAAT
TTTTTCCCTGATTCAGGTGTGTGTACTTATTATACCAGCGGTGGAGACAATGACTTACGTTACTGGTTCCGTGGTATCGA
TAAACACAATACTTTATCAATCGGAAAACAGAATATCAAAAAGGCAGCAGGCAAACTGTTGAAATCAGAGGAAGGAGCGA
CTGAATTAGTTGTATTTGAGAATCAAGGATATGATAACTTAAAGCACCGTCGTGCAGTCTTTTACGTAAACAAAAAATTC
TTTGTATTAGTAGATGAAGGTATTGGAAATGCAGAAGGTACTATTAATCTAAGTTTCAATCTTTGCGAAGGCACTGCCAG
CGAAGTTGTTATGGATACAGATAAAAATGGAGTCCATACAGCATTCAGCAATAATAATAACATTATAGTCCGCACTTTTG
CCAATAAAGCAGTAACCTGTTCTCCATTCACGGGGCGTATAGCCTATCTCGTAGACGGGGCTTACAACACACGTCAATCT
TATACCATCGATATGAATAAGAGTGCTGATGAAACCGCACGTTACATTACAGTTATTCTTCCAGTCAATGGAAGTACTGA
TACGTCCAGTATCTCAGCCAAATTCATAGATAGCGGATATTCCGAAAACAGCGCTTCTGTAGAAGTAAGTGTGAATGGAG
AGACACATACATTATCTTATACCTTATAA

Upstream 100 bases:

>100_bases
TGAACAAAGTATGAACAACCTAAATTAAAGAATCTAATTAATGAGGTTACATTTGCAACAGTAAAATAACACTTTTAATA
ATTATAAAACCTAATAAAGT

Downstream 100 bases:

>100_bases
ACTAATAACTCTTAAAATATGAGATCTAAATTACTAAACATTACTTCAAGATTACTAGGAGTCCTCATAGTAATTGCAGT
GACAATAGTCAATAGTTCCT

Product: heparitin sulfate lyase

Products: NA

Alternate protein names: Heparinase III Protein Heparitin Sulfate Lyase; Heparinase III Protein

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGLEKVKEFYEAGEHYYAANALL
EYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHVNNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHR
HQWFIPQAKAYRVSGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQIMSDGWHKEMSLHYHIGIVA
DFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPNYFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSE
ELKYMQTAGNGGTAQGRTPNNDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFENQGYDNLKHRRAVFYVNKKF
FVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHTAFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQS
YTIDMNKSADETARYITVILPVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL

Sequences:

>Translated_702_residues
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGLEKVKEFYEAGEHYYAANALL
EYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHVNNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHR
HQWFIPQAKAYRVSGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQIMSDGWHKEMSLHYHIGIVA
DFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPNYFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSE
ELKYMQTAGNGGTAQGRTPNNDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFENQGYDNLKHRRAVFYVNKKF
FVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHTAFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQS
YTIDMNKSADETARYITVILPVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL
>Mature_702_residues
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGLEKVKEFYEAGEHYYAANALL
EYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHVNNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHR
HQWFIPQAKAYRVSGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQIMSDGWHKEMSLHYHIGIVA
DFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPNYFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSE
ELKYMQTAGNGGTAQGRTPNNDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFENQGYDNLKHRRAVFYVNKKF
FVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHTAFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQS
YTIDMNKSADETARYITVILPVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79424; Mature: 79424

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGL
CCCEEHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCCCCCHHHHHEECCCCCCH
EKVKEFYEAGEHYYAANALLEYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHV
HHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCCCEEEEEEEEEC
NNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHRHQWFIPQAKAYRVSGDEKYI
CCEECCHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHH
QSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQ
HHHHHCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IMSDGWHKEMSLHYHIGIVADFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPN
HHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCC
YFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSEELKYMQTAGNGGTAQGRTPN
EEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCC
NDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
CCHHHEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCEEEEEECCCC
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFE
CCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHCCCCCEEEEEEE
NQGYDNLKHRRAVFYVNKKFFVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHT
CCCCCCHHHCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEEE
AFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQSYTIDMNKSADETARYITVIL
EEECCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEE
PVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL
ECCCCCCCCCEEEHHHHCCCCCCCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGL
CCCEEHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCCCCCHHHHHEECCCCCCH
EKVKEFYEAGEHYYAANALLEYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHV
HHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCCCEEEEEEEEEC
NNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHRHQWFIPQAKAYRVSGDEKYI
CCEECCHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHH
QSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQ
HHHHHCCCEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IMSDGWHKEMSLHYHIGIVADFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPN
HHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCC
YFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSEELKYMQTAGNGGTAQGRTPN
EEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCC
NDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
CCHHHEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCEEEEEECCCC
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFE
CCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHCCCCCEEEEEEE
NQGYDNLKHRRAVFYVNKKFFVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHT
CCCCCCHHHCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEEE
AFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQSYTIDMNKSADETARYITVIL
EEECCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEE
PVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL
ECCCCCCCCCEEEHHHHCCCCCCCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA