| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350069
Identifier: 29350069
GI number: 29350069
Start: 6102676
End: 6104856
Strand: Reverse
Name: 29350069
Synonym: BT_4661
Alternate gene names: NA
Gene position: 6104856-6102676 (Counterclockwise)
Preceding gene: 29350070
Following gene: 29350068
Centisome position: 97.52
GC content: 39.2
Gene sequence:
>2181_bases ATGAGATCTAAATTACTAAACATTACTTCAAGATTACTAGGAGTCCTCATAGTAATTGCAGTGACAATAGTCAATAGTTC CTGTTCGGATACAGAAACTACTGACTCTACGAAGTTTACTATTTATTATACAGGAATGACTGATATCGGTCCATCTATGA CAGGAGTTATCAGTAGCCCGACTTACAAAGGCGGCACTCCATACGATTTTGCCATTACCAGAATCACTCTTGATGGAGAA CCGTTTTCCGATAGCATCTTCGCCATTGATTCGGAAACAGGAAAAATTACTTTAAATAGTACAAGCAATACTCCTGTCGG ACTATACAAACTATCTGTCGCATGTTATTCCAACAATAACAGATATGAATATACCGACATTGTGGAAATCAACATGATGA AACCTGTGCCTGATGGAATCAAAACAGATCCGGAGAAACTACAGGTAGAATATGCAGATATTATCGACACAGAAAGCAGC AATGAACTGCCCACCTCTCAAATTAGAACTGAAGGAAATCATATTTCTATTTCAAACTACACCATTGCTTCTGCAATGTG GAATGGAGTTGCAGTAGAAAGTCCCGAAGACTACTTTGCTGTATCAGATAAAGGTGAAATTTCCATCATCAAAGGAAATC AAAACATTCAGCCTGGTAAGTACATCCTATCATTCAAACTGACAACTGCCGCAACTGGAGAGGATCCTGAAAAAGGAATT TTCGAGAATGCGTTGGAAATCAATGTAACTTCCCGCCCACTTTCATTAATATACACTCCTGATGAAGGAAAAATAGAGGA AGAAGGAGAGCGTAGTCCTGAGACCACTTTCCAAAGTAATATTCCCGCATTAAAAGGTTCTGCGGAAGGGCTTGTATACA GTATCAGTTCAGTTAGTCCGAATACGGATAAAATCACAATTGATCCGACAACGGGCGTATTGTCTGTAGCGGCTCATCAT GGATTCAAGGATGGAGAAAAATATCAAATCAGTGTGAAGGCTATCAATGAATTTTCTCCAGAAGGCGTAGTATTCGAGAA TGTATTCACACTAAATACAGTTGAATTTATAGAACCGATAGCTAACTTCGGATACGCTGATGTAAACGATGTACAAGCTG TAGAAATCGACATTAACAAAAATGAGAATTTCAAAGGTGATGAAGTGAAATATGAATTTGTAAATCTGCCAACTGACCTT CAAGGTGAATTAGCTCTTGATCTGGATGGAAACATCGCCATTAAGAAGGGAAACAAGATTCCTGTCGGGCAATATACAGT TCAGGTTATGGCTACCAATACCAAAGGTTCAGAGACTGCTACATTTACATTAACAATCACAGCAAATCCGAACTATTTTA CTTATTTCCGCTACGGAAATAACCTCGGATTAACTCCTATTGAAAACTATGCCGATCAATTCAGAATTGAGGCAGGCGGT AAACTTAACTCTGTAAAACCGGTTCCAACAGCAACAGATGCCAAAGATGGTTTGTCTTCACTAAAGTGGGAAGTAGAATT GAAACATAATCCCAATAATACAAAAGCGACTATTAATGAATCTACCGGACAGATTACAATAACCGGATTAAAACAAGGAC AATGTGGCATGGTAATGGTTACCGCAACAGCCGGAGAAGGAAAAACGGCAGTTTCTGTAAAACAACCTGTATTTTTCCAT TTCTCAATGATTTCAGACAGTAATGTACAATTAGAGTATACTCCGTTTGTCTTCCAGGTAAATCCGGCAAGAGGTGGTGA GTCAATAGCTCCAAGTTTAGGAGCAGGTATAGATAAATCTACATTCAGATTAGACTATCGCCGTGACTTCTTCTACTATA ATATAGCTGGTCCGGATTCACATATAAGTGGGGCATTGGCACAAAAAGTAGATAACTTCTTATCGGAAATGTGGAATTCT TATGATGCGACAGCCGGTACATCCAGAAAACCGATGTCTTACTTTGAAAACACTACTAATTTAAGCAAAGCGTTAGGTTA CATTGACCAAACAGACTTCAAAGTACACATTAACCCAAATCTGTGGCGCAACAAAGACGGCTACGCTAACGGGGCTATGA TTGGTCAGATAACCTATGACGTCACCGGAAAAGATCCACAAGCTGCAACAAGCGGGGCACGGGTTTCTCCGATATTTATT TGGTTTGATACTAAGTTCTAA
Upstream 100 bases:
>100_bases AGATAGCGGATATTCCGAAAACAGCGCTTCTGTAGAAGTAAGTGTGAATGGAGAGACACATACATTATCTTATACCTTAT AAACTAATAACTCTTAAAAT
Downstream 100 bases:
>100_bases TAAATACATGCAAAAATACACGTTATGTACTATACAAATATAATAAAATCAATTAGCGCAAGAGGGTTGTTCACCCTCTT GGCACTGATCATGTCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MRSKLLNITSRLLGVLIVIAVTIVNSSCSDTETTDSTKFTIYYTGMTDIGPSMTGVISSPTYKGGTPYDFAITRITLDGE PFSDSIFAIDSETGKITLNSTSNTPVGLYKLSVACYSNNNRYEYTDIVEINMMKPVPDGIKTDPEKLQVEYADIIDTESS NELPTSQIRTEGNHISISNYTIASAMWNGVAVESPEDYFAVSDKGEISIIKGNQNIQPGKYILSFKLTTAATGEDPEKGI FENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYSISSVSPNTDKITIDPTTGVLSVAAHH GFKDGEKYQISVKAINEFSPEGVVFENVFTLNTVEFIEPIANFGYADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDL QGELALDLDGNIAIKKGNKIPVGQYTVQVMATNTKGSETATFTLTITANPNYFTYFRYGNNLGLTPIENYADQFRIEAGG KLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKATINESTGQITITGLKQGQCGMVMVTATAGEGKTAVSVKQPVFFH FSMISDSNVQLEYTPFVFQVNPARGGESIAPSLGAGIDKSTFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNS YDATAGTSRKPMSYFENTTNLSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFI WFDTKF
Sequences:
>Translated_726_residues MRSKLLNITSRLLGVLIVIAVTIVNSSCSDTETTDSTKFTIYYTGMTDIGPSMTGVISSPTYKGGTPYDFAITRITLDGE PFSDSIFAIDSETGKITLNSTSNTPVGLYKLSVACYSNNNRYEYTDIVEINMMKPVPDGIKTDPEKLQVEYADIIDTESS NELPTSQIRTEGNHISISNYTIASAMWNGVAVESPEDYFAVSDKGEISIIKGNQNIQPGKYILSFKLTTAATGEDPEKGI FENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYSISSVSPNTDKITIDPTTGVLSVAAHH GFKDGEKYQISVKAINEFSPEGVVFENVFTLNTVEFIEPIANFGYADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDL QGELALDLDGNIAIKKGNKIPVGQYTVQVMATNTKGSETATFTLTITANPNYFTYFRYGNNLGLTPIENYADQFRIEAGG KLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKATINESTGQITITGLKQGQCGMVMVTATAGEGKTAVSVKQPVFFH FSMISDSNVQLEYTPFVFQVNPARGGESIAPSLGAGIDKSTFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNS YDATAGTSRKPMSYFENTTNLSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFI WFDTKF >Mature_726_residues MRSKLLNITSRLLGVLIVIAVTIVNSSCSDTETTDSTKFTIYYTGMTDIGPSMTGVISSPTYKGGTPYDFAITRITLDGE PFSDSIFAIDSETGKITLNSTSNTPVGLYKLSVACYSNNNRYEYTDIVEINMMKPVPDGIKTDPEKLQVEYADIIDTESS NELPTSQIRTEGNHISISNYTIASAMWNGVAVESPEDYFAVSDKGEISIIKGNQNIQPGKYILSFKLTTAATGEDPEKGI FENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYSISSVSPNTDKITIDPTTGVLSVAAHH GFKDGEKYQISVKAINEFSPEGVVFENVFTLNTVEFIEPIANFGYADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDL QGELALDLDGNIAIKKGNKIPVGQYTVQVMATNTKGSETATFTLTITANPNYFTYFRYGNNLGLTPIENYADQFRIEAGG KLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKATINESTGQITITGLKQGQCGMVMVTATAGEGKTAVSVKQPVFFH FSMISDSNVQLEYTPFVFQVNPARGGESIAPSLGAGIDKSTFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNS YDATAGTSRKPMSYFENTTNLSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFI WFDTKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79415; Mature: 79415
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKLLNITSRLLGVLIVIAVTIVNSSCSDTETTDSTKFTIYYTGMTDIGPSMTGVISSP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCC TYKGGTPYDFAITRITLDGEPFSDSIFAIDSETGKITLNSTSNTPVGLYKLSVACYSNNN CCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCC RYEYTDIVEINMMKPVPDGIKTDPEKLQVEYADIIDTESSNELPTSQIRTEGNHISISNY CEEEEEEEEEEEECCCCCCCCCCHHHEEEEEHHEECCCCCCCCCHHHHCCCCCEEEECCE TIASAMWNGVAVESPEDYFAVSDKGEISIIKGNQNIQPGKYILSFKLTTAATGEDPEKGI EEEHHHCCCEEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCH FENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYSISSVSP HCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCC NTDKITIDPTTGVLSVAAHHGFKDGEKYQISVKAINEFSPEGVVFENVFTLNTVEFIEPI CCCEEEECCCCCEEEHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHHHHH ANFGYADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDLQGELALDLDGNIAIKKGNKI HHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC PVGQYTVQVMATNTKGSETATFTLTITANPNYFTYFRYGNNLGLTPIENYADQFRIEAGG CCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCHHHCCCCEEEEECCC KLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKATINESTGQITITGLKQGQCGMVMV CCCCCCCCCCCCCCHHCHHHCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCEEEE TATAGEGKTAVSVKQPVFFHFSMISDSNVQLEYTPFVFQVNPARGGESIAPSLGAGIDKS EEECCCCCEEEEECCCEEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCHHCCCCCCC TFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNSYDATAGTSRKPMSYFENTTN EEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCC LSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFI HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEE WFDTKF EEECCC >Mature Secondary Structure MRSKLLNITSRLLGVLIVIAVTIVNSSCSDTETTDSTKFTIYYTGMTDIGPSMTGVISSP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCC TYKGGTPYDFAITRITLDGEPFSDSIFAIDSETGKITLNSTSNTPVGLYKLSVACYSNNN CCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCC RYEYTDIVEINMMKPVPDGIKTDPEKLQVEYADIIDTESSNELPTSQIRTEGNHISISNY CEEEEEEEEEEEECCCCCCCCCCHHHEEEEEHHEECCCCCCCCCHHHHCCCCCEEEECCE TIASAMWNGVAVESPEDYFAVSDKGEISIIKGNQNIQPGKYILSFKLTTAATGEDPEKGI EEEHHHCCCEEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCH FENALEINVTSRPLSLIYTPDEGKIEEEGERSPETTFQSNIPALKGSAEGLVYSISSVSP HCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCC NTDKITIDPTTGVLSVAAHHGFKDGEKYQISVKAINEFSPEGVVFENVFTLNTVEFIEPI CCCEEEECCCCCEEEHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHHHHH ANFGYADVNDVQAVEIDINKNENFKGDEVKYEFVNLPTDLQGELALDLDGNIAIKKGNKI HHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC PVGQYTVQVMATNTKGSETATFTLTITANPNYFTYFRYGNNLGLTPIENYADQFRIEAGG CCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCHHHCCCCEEEEECCC KLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKATINESTGQITITGLKQGQCGMVMV CCCCCCCCCCCCCCHHCHHHCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCEEEE TATAGEGKTAVSVKQPVFFHFSMISDSNVQLEYTPFVFQVNPARGGESIAPSLGAGIDKS EEECCCCCEEEEECCCEEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCHHCCCCCCC TFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNSYDATAGTSRKPMSYFENTTN EEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCC LSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFI HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEE WFDTKF EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA