| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350063
Identifier: 29350063
GI number: 29350063
Start: 6090900
End: 6092417
Strand: Reverse
Name: 29350063
Synonym: BT_4655
Alternate gene names: NA
Gene position: 6092417-6090900 (Counterclockwise)
Preceding gene: 29350064
Following gene: 29350062
Centisome position: 97.32
GC content: 49.74
Gene sequence:
>1518_bases ATGCCATCGGCAAGTGACCTCAAAATGTACTGGGGAGACCTGCACAACCATTGTAACATCACATACGGACACGGCGATAT GCGCGATGCTTTTGAAGCAGCGAAAGGACAGTTGGATTTTGTAAGTGTAACACCCCACGCCATGTGGCCGGATATCCCCG GAGCAGACGATCCACGCCTGAAATGGGTAATCGACTACCATACCGGTGCTTTCAAACGTTTGCGCGAAGGCGGATATGAG AAGTACGTAGCCATGACAAACGAATATAATAAAGAAGGAGAATTCCTCACTTTCGTTGGATATGAAGCACACAGCATGGA ACATGGCGACCATGTTGCCTTGAACTACGATCTCGATGCACCGCTTGTAGAGTGTACCTCCATCGAAGACTGGAAACAGA AAGCCAAAGGACACAAAGTATTTATCACTCCTCACCATATGGGCTATCAGGGTGGTTATCGCGGCTATAACTGGAAATGC TTTACCGAAGGAGACCAGACCCCGTTCGTAGAAATGTATTCCCGTCACGGTCTGGCCGAAAGCGATCAGGGGGACTATCC ATACTTGCACGATATGGGCCCCCGCCAATGGGAAGGAACCATTCAATATGGTCTGGAACTGGGTAATAAATTCGGTATTA TGGCTTCTACCGACCAACATTCGGGTTATCCGGGCAGTTATGGTGACGGCCGTATCGGTGTACTGGCTCCGTCATTGACC CGCGACGCTATATGGGAAGCACTTCGGACCCGCCACGTATGCGCCGCAACCGGCGATAAAATTTTGATTGACTTCCGCCT CAACGATGCTTTCATGGGTGACGTAGTGCGTGGCAACAGCCGCCGCATTTATCTGAATGTTACCGGAGAAAGTTGCATCG ACTATGTGGATATCGTCAAGAACGGTCAGATTCTGGCCCGCATGAATGGTCCGTTGACTCCGGTTGCCCCCGAAGGTGAT ACTGTCCGCTGCAAAGTGAAAGTAGATTTCGGATGGAACCGTGAAGAGCAGTATGTACACTGGCAAGGTAAATTGTCTGT AGACAAAGGACGCATTCTGAGCGTCACTCCATGTTTCCGCGGTGCAGCCTTCACTTCTCCGCAAGAAGGGGAAACAGAAT TCCATACTCACGTAAACCGCATTGTATCCGCAGACGAAAAAGAAACCGAACTGGATATGTACAGCAGCAAGAATCCGAAT ACGACTACCGCTGCCATGCAAGCTGTCATCCTCGAAGTAGAGATGCCGAAAGACGGAAAAGTGATTGCTGATTTCAACGG CAAGAAGTTTGAACACACATTGGGCGAATTGCTCGAAGGCTCACGTTCGCACTTCATGATCGGCTGGCTGAGCGAAGCGA TTCTCTTCAATCGTGCTATGCCCGAAAGCTGTTTCACTGTGGAACACTATATGGAAGATAAAGAGCCTCAGCGTGATACA GATTACTACTACGTGCGTGTTCGCCAGCGTGACGGGCAATGGGCATGGAGTTCACCTATCTGGGCAGAAAGAGTATAA
Upstream 100 bases:
>100_bases AAATTTTATAAAGAATACTGGCTGGTCTTTTTTAGGACTGGCAGCATCCGGCAGCCTGCTCGGCTCTTGTGCGGCAGGAA GTAAAGAAGCCAAAAAGAAA
Downstream 100 bases:
>100_bases ACTGGTATATGAAAGAAAACAGTTGCTTTGCTTGTGCCAAGCCGTTGGCACAGTTGTGTCAAGCTGTTGGCACTGCTATG CCAAGCCTTTGGCACAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYE KYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKC FTEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGD TVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPN TTTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT DYYYVRVRQRDGQWAWSSPIWAERV
Sequences:
>Translated_505_residues MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYE KYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKC FTEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGD TVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPN TTTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT DYYYVRVRQRDGQWAWSSPIWAERV >Mature_504_residues PSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRLKWVIDYHTGAFKRLREGGYEK YVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDAPLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCF TEGDQTPFVEMYSRHGLAESDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLTR DAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVKNGQILARMNGPLTPVAPEGDT VRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFRGAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNT TTAAMQAVILEVEMPKDGKVIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDTD YYYVRVRQRDGQWAWSSPIWAERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57474; Mature: 57343
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRL CCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCE KWVIDYHTGAFKRLREGGYEKYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDA EEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC PLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCFTEGDQTPFVEMYSRHGLAE CEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC SDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT CCCCCCCCHHCCCCCCCCCCEEEEHHCCCEECEEEECCCCCCCCCCCCCCEEEEECCCHH RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVK HHHHHHHHHHCEEEEECCCEEEEEEEECCCEECCEEECCCCEEEEEECCHHHHHHHHHHC NGQILARMNGPLTPVAPEGDTVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFR CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCC GAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNTTTAAMQAVILEVEMPKDGK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHEEEEEEEEEECCCCCC VIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT EEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC DYYYVRVRQRDGQWAWSSPIWAERV CEEEEEEEECCCCEEECCCCHHCCC >Mature Secondary Structure PSASDLKMYWGDLHNHCNITYGHGDMRDAFEAAKGQLDFVSVTPHAMWPDIPGADDPRL CCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCE KWVIDYHTGAFKRLREGGYEKYVAMTNEYNKEGEFLTFVGYEAHSMEHGDHVALNYDLDA EEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC PLVECTSIEDWKQKAKGHKVFITPHHMGYQGGYRGYNWKCFTEGDQTPFVEMYSRHGLAE CEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC SDQGDYPYLHDMGPRQWEGTIQYGLELGNKFGIMASTDQHSGYPGSYGDGRIGVLAPSLT CCCCCCCCHHCCCCCCCCCCEEEEHHCCCEECEEEECCCCCCCCCCCCCCEEEEECCCHH RDAIWEALRTRHVCAATGDKILIDFRLNDAFMGDVVRGNSRRIYLNVTGESCIDYVDIVK HHHHHHHHHHCEEEEECCCEEEEEEEECCCEECCEEECCCCEEEEEECCHHHHHHHHHHC NGQILARMNGPLTPVAPEGDTVRCKVKVDFGWNREEQYVHWQGKLSVDKGRILSVTPCFR CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCC GAAFTSPQEGETEFHTHVNRIVSADEKETELDMYSSKNPNTTTAAMQAVILEVEMPKDGK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHEEEEEEEEEECCCCCC VIADFNGKKFEHTLGELLEGSRSHFMIGWLSEAILFNRAMPESCFTVEHYMEDKEPQRDT EEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC DYYYVRVRQRDGQWAWSSPIWAERV CEEEEEEEECCCCEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA