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The map label for this gene is 29349877

Identifier: 29349877

GI number: 29349877

Start: 5878345

End: 5878827

Strand: Reverse

Name: 29349877

Synonym: BT_4469

Alternate gene names: NA

Gene position: 5878827-5878345 (Counterclockwise)

Preceding gene: 29349882

Following gene: 29349876

Centisome position: 93.91

GC content: 48.24

Gene sequence:

>483_bases
ATGGATTTTTATTATCCGAACCTGAACAATGATATGTGGCGCATTGTCGGACTCTTGTTTTTCGGAGACAAAGATCACTT
TCTGAACGATACGCGGAAAGCATTCTGCCGGGAACAGATTATTGACTTCCTGAATGAAAAAGGAATCGCCCTGTTCGATA
CAGCCTCATCTATCCGGCGTTTGCAGGATAACGCTTCGGACAAATTTCTGGAAGTGGTGCAACCGACGGACATTGCTGCA
TTACTCCGCCAACTGCCCGAATGCAGAGCGATCGTCACCACCGGACAGAAGGCAACGGATACGCTCCGTGCACAACTGGA
AGTGGAAGAACCGAAAGTAGGAGACTATGCCGAATTTGTGTTTGAAGGACGGGCGATGAGACTCTACCGGATGCCTTCTT
CCTCACGGGCGTACCCGCTTGCATTAGATAAAAAAGCCGCCGCCTATCGGATTATGTATCAGGATTTGCAGATGGTAATT
TAA

Upstream 100 bases:

>100_bases
GGAGATTGAAATCGAAAAACATCCTTTAAAACCCTTTCTCCCACCAAAAGCAAAGTTGCTGATGCTGGGAAGTTTTCCGC
CACAAAGAAAACGGTGGTCG

Downstream 100 bases:

>100_bases
GTAATAGGTATTAAGTAATAAGTATTAGATATTAATCGATAAATAGTATATAGTATGACACCTTTATTTTTGCAATATCC
GGCGTGCAGTACATGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: GT/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDFYYPNLNNDMWRIVGLLFFGDKDHFLNDTRKAFCREQIIDFLNEKGIALFDTASSIRRLQDNASDKFLEVVQPTDIAA
LLRQLPECRAIVTTGQKATDTLRAQLEVEEPKVGDYAEFVFEGRAMRLYRMPSSSRAYPLALDKKAAAYRIMYQDLQMVI

Sequences:

>Translated_160_residues
MDFYYPNLNNDMWRIVGLLFFGDKDHFLNDTRKAFCREQIIDFLNEKGIALFDTASSIRRLQDNASDKFLEVVQPTDIAA
LLRQLPECRAIVTTGQKATDTLRAQLEVEEPKVGDYAEFVFEGRAMRLYRMPSSSRAYPLALDKKAAAYRIMYQDLQMVI
>Mature_160_residues
MDFYYPNLNNDMWRIVGLLFFGDKDHFLNDTRKAFCREQIIDFLNEKGIALFDTASSIRRLQDNASDKFLEVVQPTDIAA
LLRQLPECRAIVTTGQKATDTLRAQLEVEEPKVGDYAEFVFEGRAMRLYRMPSSSRAYPLALDKKAAAYRIMYQDLQMVI

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18515; Mature: 18515

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYYPNLNNDMWRIVGLLFFGDKDHFLNDTRKAFCREQIIDFLNEKGIALFDTASSIRR
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
LQDNASDKFLEVVQPTDIAALLRQLPECRAIVTTGQKATDTLRAQLEVEEPKVGDYAEFV
HHCCCCHHHHHHCCCCCHHHHHHHCCHHHEEHHCCCHHHHHHHHEEEECCCCCCHHHHHH
FEGRAMRLYRMPSSSRAYPLALDKKAAAYRIMYQDLQMVI
HCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFYYPNLNNDMWRIVGLLFFGDKDHFLNDTRKAFCREQIIDFLNEKGIALFDTASSIRR
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
LQDNASDKFLEVVQPTDIAALLRQLPECRAIVTTGQKATDTLRAQLEVEEPKVGDYAEFV
HHCCCCHHHHHHCCCCCHHHHHHHCCHHHEEHHCCCHHHHHHHHEEEECCCCCCHHHHHH
FEGRAMRLYRMPSSSRAYPLALDKKAAAYRIMYQDLQMVI
HCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA