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The map label for this gene is ynbB [H]

Identifier: 29349871

GI number: 29349871

Start: 5873217

End: 5874173

Strand: Reverse

Name: ynbB [H]

Synonym: BT_4463

Alternate gene names: 29349871

Gene position: 5874173-5873217 (Counterclockwise)

Preceding gene: 29349872

Following gene: 29349870

Centisome position: 93.83

GC content: 45.77

Gene sequence:

>957_bases
ATGAAACAACTATTGGACAAATTATTCCCTACGCTAAGCGATGAGTTAATTATTGTAATCACCCTTATTATCTGTTTGCT
GGTGACGGCAAGCATCGCCCTCTTTCTGGTAAAAAAGCTGTCGCCGAAAACCAATATCAGCGAACTGGTTGCCCGTACCC
GCTCATGGTGGATTATGGCAGCAATGTTTATCGGTGCCGTTTTCATCAGCTACGACATTTCTTATTTTTTTCTTGCATTT
CTCTCTTTTATAGCATTCAGAGAACTTTATTCGGTATTAGGATTCAGAGAGGCAGACCGCCGTGCACTGTTCTGGGGCAT
ATTGGCTATTCCTATCCAATACTATCTTGCTTATATCGCGTGGTATGGGGCATACATCATATTCATCCCCGTAGTTATGT
TCCTGTTATTGCCATTACGACTGGTATTGAAAGGCGATACACACGGAATCACTAAATCCATCGCTTTGCTGCAATGGATT
CTGATGCTTTCTGTATTTGGTATCAGCCACCTCGCTTATCTTCTCTCGTTACCCGAATTGCCGGGCTTCAATGCGGGAGG
ACGCGGACTGCTGATGTTCCTCGTGTTCCTTACAGAAATCAACGATATCATGCAGTTCGTCTGGGGAAAACTCTTCGGAC
GTCACAAAATTCTGCCCAAAGTGAGTCCCAACAAAACATGGGAAGGCTTTTTGGGAGGTGTCGTCAGCACTACGGTTATA
GGATACTTTCTGGGATTCCTCACTCCGCTCTCCACGCCCAACGTAATTCTGGTCAGCGCCCTCATTGCCATTGCCGGATT
TGCGGGAGATGTAGTCATCTCGGCCATCAAACGTGATAAAGGCATCAAAGACATGGGAGATAGCATCCCCGGTCATGGTG
GAGTATTCGACCGCATAGACTCTCTGTCCTATACAGCTCCGGTGTTCTTCCACCTCGTTTATTATATAGCTTATTAG

Upstream 100 bases:

>100_bases
AGATCGTGTGCCTCATTACTCTTATACTAATGAATATCGGTCTGATCGCCACTCTTATACACCGTTTATATCTTATGTCT
CACACAAACAACGAAGCGAA

Downstream 100 bases:

>100_bases
CCGGCATACTATGAAAAAAAGATTCATGCAGTCTGCCATGATGCAGATACTATATAAAGGTATATTCCGGTGGTTTCTGA
AACTGATCGTGGGAGTCCAG

Product: phosphatidate cytidylyltransferase

Products: diphosphate; CDPdiacylglycerol

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKQLLDKLFPTLSDELIIVITLIICLLVTASIALFLVKKLSPKTNISELVARTRSWWIMAAMFIGAVFISYDISYFFLAF
LSFIAFRELYSVLGFREADRRALFWGILAIPIQYYLAYIAWYGAYIIFIPVVMFLLLPLRLVLKGDTHGITKSIALLQWI
LMLSVFGISHLAYLLSLPELPGFNAGGRGLLMFLVFLTEINDIMQFVWGKLFGRHKILPKVSPNKTWEGFLGGVVSTTVI
GYFLGFLTPLSTPNVILVSALIAIAGFAGDVVISAIKRDKGIKDMGDSIPGHGGVFDRIDSLSYTAPVFFHLVYYIAY

Sequences:

>Translated_318_residues
MKQLLDKLFPTLSDELIIVITLIICLLVTASIALFLVKKLSPKTNISELVARTRSWWIMAAMFIGAVFISYDISYFFLAF
LSFIAFRELYSVLGFREADRRALFWGILAIPIQYYLAYIAWYGAYIIFIPVVMFLLLPLRLVLKGDTHGITKSIALLQWI
LMLSVFGISHLAYLLSLPELPGFNAGGRGLLMFLVFLTEINDIMQFVWGKLFGRHKILPKVSPNKTWEGFLGGVVSTTVI
GYFLGFLTPLSTPNVILVSALIAIAGFAGDVVISAIKRDKGIKDMGDSIPGHGGVFDRIDSLSYTAPVFFHLVYYIAY
>Mature_318_residues
MKQLLDKLFPTLSDELIIVITLIICLLVTASIALFLVKKLSPKTNISELVARTRSWWIMAAMFIGAVFISYDISYFFLAF
LSFIAFRELYSVLGFREADRRALFWGILAIPIQYYLAYIAWYGAYIIFIPVVMFLLLPLRLVLKGDTHGITKSIALLQWI
LMLSVFGISHLAYLLSLPELPGFNAGGRGLLMFLVFLTEINDIMQFVWGKLFGRHKILPKVSPNKTWEGFLGGVVSTTVI
GYFLGFLTPLSTPNVILVSALIAIAGFAGDVVISAIKRDKGIKDMGDSIPGHGGVFDRIDSLSYTAPVFFHLVYYIAY

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=299, Percent_Identity=41.4715719063545, Blast_Score=204, Evalue=8e-54,
Organism=Escherichia coli, GI87081696, Length=121, Percent_Identity=45.4545454545455, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: 2.7.7.41

Molecular weight: Translated: 35576; Mature: 35576

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHCC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; phosphatidate

Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]