Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349768

Identifier: 29349768

GI number: 29349768

Start: 5749815

End: 5750261

Strand: Reverse

Name: 29349768

Synonym: BT_4360

Alternate gene names: NA

Gene position: 5750261-5749815 (Counterclockwise)

Preceding gene: 29349769

Following gene: 29349763

Centisome position: 91.85

GC content: 42.51

Gene sequence:

>447_bases
ATGAAACTGAGCCAACAATCTCTGTCTACCATCGAATCGGCTATCCAAAAGGCAGCCGGCAAATATGTATGTGGCTGCGA
CCAGACAGCCGTAACCGATATTCATTTACAACCGGACCAAACATCGGGACAACTCACTATTTATAACGACGATGACGAGG
AATTGGCTAATGTAATGATTGAAGAGTGGGCGACTTACGATGGAGATGATTTCATGGAAAATGTAAAGCCCAACCTGAAA
AGTACCCTTTGCAGAATGAAAGATGCAGGCGACTTCGATAAAGTAACAATATTAAAGCCTTATTCATTCGTACTGGTAGA
TGAAGATAAGGAAACAGTTGCAGAGCTGTTGCTGATAGACGATGATACGTTGCTCGTGGATGACGAACTGCTGAAAGGGC
TGGATAAAGAACTGGACGAGTTTCTGAAAAACTTGTTGGAGAAATAA

Upstream 100 bases:

>100_bases
CTAAAAATGCAAATGGAGCGATTTAATGATGATTTTTAAGGAAATCATGCATTGATTATTATTTTTTTTATACCTTTGAG
GTAACAAAAAGGAAGAACCT

Downstream 100 bases:

>100_bases
CTATGTTCGATTGCACGGCATGGCCTTGCCGAAGCAATTATCATTTATAAAAAGAATAATCGGAAGTAAAAGGTATTCCC
CTGTTTACTTCCGATTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPNLK
STLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKELDEFLKNLLEK

Sequences:

>Translated_148_residues
MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPNLK
STLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKELDEFLKNLLEK
>Mature_148_residues
MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPNLK
STLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKELDEFLKNLLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16686; Mature: 16686

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMI
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHH
EEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLID
HHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCHHHHHHHHHCC
DDTLLVDDELLKGLDKELDEFLKNLLEK
CCCEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMI
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHH
EEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLID
HHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCHHHHHHHHHCC
DDTLLVDDELLKGLDKELDEFLKNLLEK
CCCEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA