| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349169
Identifier: 29349169
GI number: 29349169
Start: 4881796
End: 4882374
Strand: Reverse
Name: 29349169
Synonym: BT_3761
Alternate gene names: NA
Gene position: 4882374-4881796 (Counterclockwise)
Preceding gene: 29349170
Following gene: 29349168
Centisome position: 77.99
GC content: 46.29
Gene sequence:
>579_bases ATGGACACTCAACAAATAGATGTTATGGTAGCCGACGCCTCACATGAGGTTTACGTTGACACTATTTTGGAAACTATCAG AAATGCTGCTGCCGTACGAGGAACCGGAATCGCAGAGCGCACACACGAATACGTAGCGACTAAAATGAAAGAGGGCAAAG CAATAATCGCGCTCTGTGGCGACACATTCGCAGGTTTCACCTATATCGAATCATGGGGAAACAAGCAATACGTAGCAACC TCCGGTCTGATTGTACATCCCGATTTTCGCGGATTAGGATTGGCAAAGCGCATCAAACAAGCATCTTTCCAACTGGCACG TCTCCGATGGCCGAAAGCTAAGATTTTCAGTCTGACATCCGGAGCCGCAGTGATGAAAATGAACACCGAACTAGGATATG TCCCTGTCACTTTCAATGAACTGACAGACGACGAAGCTTTCTGGAAAGGATGCGAAGGCTGCACCAACCACGATATACTG GCAGCTAAAAACCGTAAGTTCTGCATCTGCACAGCCATGCTGTACGATCCGACAGACCCACGGAACATAAAAAAAGAACA AGAAAGAAATAACATTTAA
Upstream 100 bases:
>100_bases CTGGTTCTGCGTGAAGGAGTAGCCACAAGCAAAGTACGTCAGCTTTTGTCGCTCATCATTCCGAATATCGAATAACTATA CTTATATTATATATAAAGAA
Downstream 100 bases:
>100_bases TATATACAGCACTATGGAAGAAAAGAAGAAAAAAGTAGTGGTGGCATTCAGCGGCGGACTGGACACATCGTTCACCGTCA TGTACCTCGCTAAAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MDTQQIDVMVADASHEVYVDTILETIRNAAAVRGTGIAERTHEYVATKMKEGKAIIALCGDTFAGFTYIESWGNKQYVAT SGLIVHPDFRGLGLAKRIKQASFQLARLRWPKAKIFSLTSGAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCTNHDIL AAKNRKFCICTAMLYDPTDPRNIKKEQERNNI
Sequences:
>Translated_192_residues MDTQQIDVMVADASHEVYVDTILETIRNAAAVRGTGIAERTHEYVATKMKEGKAIIALCGDTFAGFTYIESWGNKQYVAT SGLIVHPDFRGLGLAKRIKQASFQLARLRWPKAKIFSLTSGAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCTNHDIL AAKNRKFCICTAMLYDPTDPRNIKKEQERNNI >Mature_192_residues MDTQQIDVMVADASHEVYVDTILETIRNAAAVRGTGIAERTHEYVATKMKEGKAIIALCGDTFAGFTYIESWGNKQYVAT SGLIVHPDFRGLGLAKRIKQASFQLARLRWPKAKIFSLTSGAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCTNHDIL AAKNRKFCICTAMLYDPTDPRNIKKEQERNNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21445; Mature: 21445
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQQIDVMVADASHEVYVDTILETIRNAAAVRGTGIAERTHEYVATKMKEGKAIIALCG CCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECC DTFAGFTYIESWGNKQYVATSGLIVHPDFRGLGLAKRIKQASFQLARLRWPKAKIFSLTS CCHHHHHHHHHCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECC GAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCTNHDILAAKNRKFCICTAMLYDPTDP CCEEEEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCC RNIKKEQERNNI CCCCHHHHHCCC >Mature Secondary Structure MDTQQIDVMVADASHEVYVDTILETIRNAAAVRGTGIAERTHEYVATKMKEGKAIIALCG CCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECC DTFAGFTYIESWGNKQYVATSGLIVHPDFRGLGLAKRIKQASFQLARLRWPKAKIFSLTS CCHHHHHHHHHCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECC GAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCTNHDILAAKNRKFCICTAMLYDPTDP CCEEEEECCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCC RNIKKEQERNNI CCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA