| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349041
Identifier: 29349041
GI number: 29349041
Start: 4706191
End: 4709028
Strand: Reverse
Name: 29349041
Synonym: BT_3633
Alternate gene names: NA
Gene position: 4709028-4706191 (Counterclockwise)
Preceding gene: 29349042
Following gene: 29349040
Centisome position: 75.22
GC content: 48.45
Gene sequence:
>2838_bases ATGAGGTTTCTTACACTTAAAATAATGCTCTGCTTGCTTCTTTCTTTGATCATTTCCAGAATTGAAGCCAATACTAACAA TTATTCTATTTCCGGTCGTATATCCGACGAAAGGACGGGTTCGCCGTTGCCCGGCGCATCCATTTTAATCAAAGGCACCT ATTTGTGGGCTGTATCCGACCAGAAGGGGGAATTTACGATACAAGGAATACAGGAAGGCAAGTATCAATTGGAAGTTTCC TTCCTCGGTTATGTTCCGGCAACGGTTCCGGTGAATGTGAACAACAGCATCAAAGGATTAAAGATACAACTGAAGGAAAA TACACTTGCCCTGAACGACGTAATCGTTACCGCACAAGCTCCGAAGAGTGAGCTGAACACCACGCTCAACATCGGGAGTA ACGCACTGGAACATCTGCAGATATCGAATGTAAGCGATATTTCCGCCCTTCTTCCGGGAGGAAAGACGAAAGTTCCGGAC TTGACCAGCAACAATATTTTCTCTCTGCGCGACGGAGGTTCATCCGCAGGCAACGCGGCTTTCGGAACGGCGATAGAAGT AGACGGAGTACGCATCGGCAACAACTCTTCTTTCGGCAATATGACCGGAATAGATACCCGCAGCATCTCTGTGGCCGATA TCGAATCGGTAGAAGTCATCACCGGAGTACCTTCGGCAGAGTACGGAGACTTGAACAGCGGTATGGTCAAAATCCATACG AAAAAAGGGAAGACTCCGTGGAATGTACTGCTATCCATCAATCCCCGCACAGAACAGGTGTCCTTTTCCAAAGGGCTGGA CCTCGGCAACGATAAAGGAATCGTCAACATAAGCGGTGAATGGATCAAGGCTACTCAAAAGCTTAATTCACCCTATACTT CTTATACCCGCAGAGGATTCTCCGCAGGTTACAGCAATACGTTCCGGAAAGTGCTCCGATTCGACATCGGGCTGACCGGT AACATCGGAGGAATGAATACGAAGGATGATCCCGACGCATATACGGGAGAATATACCAAAGTCAGAGACAACGTTTTCCG TGCAAACACGTCATTGGCATGGCTGCTCAACAAGTCATGGATTACCAACCTCAAACTGGATGCATCGGTGTATTACAATG ATAACAAGTCGCATGCACATACACCTTATTCTTATGCGTCCGAACAGCCGGCAGTCCACGCTGAACAGGAAGGTTATTTC ATTGCAGGCAAACTGCCTTACCATTTCTTTGCCGATCAGATTGTCGATTCCAAAGAACTGGATTATGCCGCTTCGTTGAA GTACGAATGGAACCGTCGTTTCAAGAACGTTACCAGCAATCTGAAAGCAGGCGTGCAATGGAAAGGAACAGGCAATGTGG GCGACGGAGAGTATTATCAGAATCCTTCGCTGGCTCCCAACGGATATCGCCCCCGTTCTTACTCGGCTTATCCGTATATG CACAATGTTTCGTTGTATGCGGAAGAAAGCCTGTCGGTAGCTGTCGGCAGCACCATGCTGAGGCTGATGGCGGGATTGCG TTGGGAGAATCTGTTCATCAGCGGAACGCAATACGACAAGCTGAACACACTGTCGCCACGTTTCAACGCCAGATGGCAGC TGAACGAAAACATAGCGATTCGGGGCGGATGGGGAGTGACCGAGAAGCTGCCTTCGTACTATGTACTCTATCCCCGACAG GAGTATCGGGATATTCAGACTTTCGGAGTCTCATACAATAACAATGAGTCGGCTTACGTCTATTACAGTCAGCCATATAC TTTATTACACAACGAGAAACTCCGCTGGCAGAAGAATCAGAATGCCGAAATAGGAGTTGACATCAATGTAGCCCGCACCC GTATTTCACTGGTAGGATACTTTAACCGCACGAAGATGCCTTATAAATATACAAGTACCTATACTCCGTTCGCATACAAT GTTCTACAGTTGCCGGAAGGATTCGAGCTGTCCGCCAATCCGCAGATTACCGTAGACAATCAGACGGGCATGGGATATAT ACGGGACGATGAGGACAGTTACTGGACACCGCTGGACGTAAAGGTGAAAGACCAGACTTTCGTCAGGTCAACCTCTCCCG ATAACGGACCGGACATCACCCGCAGAGGAGCGGAAATGATCATCGATTTTCCGGAGATCACTCCTCTCCGTACGCAGTTC CGTGTGGATGCGGCCTATACATATAGCAAATACATAGACAATTCCTTGTCTTATTACTACCAAAACGGATGGTCGCACAC CACTCTCGCCAACCGTTCCTACCAATATGTAGGTATATATGCCAACGGCGACAACTCATCCACGACCGCCAACGGCAAGC GCACTCACTCGCTGGATGCCAATATCACAGCGATCACCCGTATCCCGAAAGCAAGGCTGATCATATCCTGCAAACTGGAA GCCTCGCTCATCAAGCGGTCGCAGAATCTCTCCGAATATAACGGTACGTCCTACGCGTTCAACGTCAGCGAGAACAGCAA CGAGAAAACAGGAGGCAGCATCTACGACGGAAATTCTTATACGGCCATTTATCCGGTTGCCTACCTCGACCTGAACAACG AGGTACATCCGTTCACCGCCGCCGAAGCCGAAAATCCGGACTTCGCGCATCTGATACGTAAATCGGGCAATGCCTATACT TTCGCAGCCGACGGATATGATCCGTATTTCTCTGCCAATATCAGCATTACCAAGGAGATAGGCGATCATGTTTCGCTGTC GTTCAACGCGATTAATTTCACGAACTCACGGGCGTATGTGAAATCATACGCAACCGGAACCAGTGCAATCTTTACCCCGA ACTTTTATTATGGACTAACCTGCCGCATTAAACTTTAG
Upstream 100 bases:
>100_bases AGAAATACCTATTTATGGGTACTCGCATACTCCCAAAATAGTCATTATTTGCGATTGTAGTATTAACGATATAGAACGAA ATTTGCACAAAATTTGTTCT
Downstream 100 bases:
>100_bases AAATATGAAACAACAGTCAATCTATATCATACTGCTTTTCGTCACATCCTTACTCGGAGGATGTACGGACCTCGACAAAG GCAATCCTTACGAAGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 945; Mature: 945
Protein sequence:
>945_residues MRFLTLKIMLCLLLSLIISRIEANTNNYSISGRISDERTGSPLPGASILIKGTYLWAVSDQKGEFTIQGIQEGKYQLEVS FLGYVPATVPVNVNNSIKGLKIQLKENTLALNDVIVTAQAPKSELNTTLNIGSNALEHLQISNVSDISALLPGGKTKVPD LTSNNIFSLRDGGSSAGNAAFGTAIEVDGVRIGNNSSFGNMTGIDTRSISVADIESVEVITGVPSAEYGDLNSGMVKIHT KKGKTPWNVLLSINPRTEQVSFSKGLDLGNDKGIVNISGEWIKATQKLNSPYTSYTRRGFSAGYSNTFRKVLRFDIGLTG NIGGMNTKDDPDAYTGEYTKVRDNVFRANTSLAWLLNKSWITNLKLDASVYYNDNKSHAHTPYSYASEQPAVHAEQEGYF IAGKLPYHFFADQIVDSKELDYAASLKYEWNRRFKNVTSNLKAGVQWKGTGNVGDGEYYQNPSLAPNGYRPRSYSAYPYM HNVSLYAEESLSVAVGSTMLRLMAGLRWENLFISGTQYDKLNTLSPRFNARWQLNENIAIRGGWGVTEKLPSYYVLYPRQ EYRDIQTFGVSYNNNESAYVYYSQPYTLLHNEKLRWQKNQNAEIGVDINVARTRISLVGYFNRTKMPYKYTSTYTPFAYN VLQLPEGFELSANPQITVDNQTGMGYIRDDEDSYWTPLDVKVKDQTFVRSTSPDNGPDITRRGAEMIIDFPEITPLRTQF RVDAAYTYSKYIDNSLSYYYQNGWSHTTLANRSYQYVGIYANGDNSSTTANGKRTHSLDANITAITRIPKARLIISCKLE ASLIKRSQNLSEYNGTSYAFNVSENSNEKTGGSIYDGNSYTAIYPVAYLDLNNEVHPFTAAEAENPDFAHLIRKSGNAYT FAADGYDPYFSANISITKEIGDHVSLSFNAINFTNSRAYVKSYATGTSAIFTPNFYYGLTCRIKL
Sequences:
>Translated_945_residues MRFLTLKIMLCLLLSLIISRIEANTNNYSISGRISDERTGSPLPGASILIKGTYLWAVSDQKGEFTIQGIQEGKYQLEVS FLGYVPATVPVNVNNSIKGLKIQLKENTLALNDVIVTAQAPKSELNTTLNIGSNALEHLQISNVSDISALLPGGKTKVPD LTSNNIFSLRDGGSSAGNAAFGTAIEVDGVRIGNNSSFGNMTGIDTRSISVADIESVEVITGVPSAEYGDLNSGMVKIHT KKGKTPWNVLLSINPRTEQVSFSKGLDLGNDKGIVNISGEWIKATQKLNSPYTSYTRRGFSAGYSNTFRKVLRFDIGLTG NIGGMNTKDDPDAYTGEYTKVRDNVFRANTSLAWLLNKSWITNLKLDASVYYNDNKSHAHTPYSYASEQPAVHAEQEGYF IAGKLPYHFFADQIVDSKELDYAASLKYEWNRRFKNVTSNLKAGVQWKGTGNVGDGEYYQNPSLAPNGYRPRSYSAYPYM HNVSLYAEESLSVAVGSTMLRLMAGLRWENLFISGTQYDKLNTLSPRFNARWQLNENIAIRGGWGVTEKLPSYYVLYPRQ EYRDIQTFGVSYNNNESAYVYYSQPYTLLHNEKLRWQKNQNAEIGVDINVARTRISLVGYFNRTKMPYKYTSTYTPFAYN VLQLPEGFELSANPQITVDNQTGMGYIRDDEDSYWTPLDVKVKDQTFVRSTSPDNGPDITRRGAEMIIDFPEITPLRTQF RVDAAYTYSKYIDNSLSYYYQNGWSHTTLANRSYQYVGIYANGDNSSTTANGKRTHSLDANITAITRIPKARLIISCKLE ASLIKRSQNLSEYNGTSYAFNVSENSNEKTGGSIYDGNSYTAIYPVAYLDLNNEVHPFTAAEAENPDFAHLIRKSGNAYT FAADGYDPYFSANISITKEIGDHVSLSFNAINFTNSRAYVKSYATGTSAIFTPNFYYGLTCRIKL >Mature_945_residues MRFLTLKIMLCLLLSLIISRIEANTNNYSISGRISDERTGSPLPGASILIKGTYLWAVSDQKGEFTIQGIQEGKYQLEVS FLGYVPATVPVNVNNSIKGLKIQLKENTLALNDVIVTAQAPKSELNTTLNIGSNALEHLQISNVSDISALLPGGKTKVPD LTSNNIFSLRDGGSSAGNAAFGTAIEVDGVRIGNNSSFGNMTGIDTRSISVADIESVEVITGVPSAEYGDLNSGMVKIHT KKGKTPWNVLLSINPRTEQVSFSKGLDLGNDKGIVNISGEWIKATQKLNSPYTSYTRRGFSAGYSNTFRKVLRFDIGLTG NIGGMNTKDDPDAYTGEYTKVRDNVFRANTSLAWLLNKSWITNLKLDASVYYNDNKSHAHTPYSYASEQPAVHAEQEGYF IAGKLPYHFFADQIVDSKELDYAASLKYEWNRRFKNVTSNLKAGVQWKGTGNVGDGEYYQNPSLAPNGYRPRSYSAYPYM HNVSLYAEESLSVAVGSTMLRLMAGLRWENLFISGTQYDKLNTLSPRFNARWQLNENIAIRGGWGVTEKLPSYYVLYPRQ EYRDIQTFGVSYNNNESAYVYYSQPYTLLHNEKLRWQKNQNAEIGVDINVARTRISLVGYFNRTKMPYKYTSTYTPFAYN VLQLPEGFELSANPQITVDNQTGMGYIRDDEDSYWTPLDVKVKDQTFVRSTSPDNGPDITRRGAEMIIDFPEITPLRTQF RVDAAYTYSKYIDNSLSYYYQNGWSHTTLANRSYQYVGIYANGDNSSTTANGKRTHSLDANITAITRIPKARLIISCKLE ASLIKRSQNLSEYNGTSYAFNVSENSNEKTGGSIYDGNSYTAIYPVAYLDLNNEVHPFTAAEAENPDFAHLIRKSGNAYT FAADGYDPYFSANISITKEIGDHVSLSFNAINFTNSRAYVKSYATGTSAIFTPNFYYGLTCRIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105376; Mature: 105376
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLTLKIMLCLLLSLIISRIEANTNNYSISGRISDERTGSPLPGASILIKGTYLWAVSD CEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEC QKGEFTIQGIQEGKYQLEVSFLGYVPATVPVNVNNSIKGLKIQLKENTLALNDVIVTAQA CCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECC PKSELNTTLNIGSNALEHLQISNVSDISALLPGGKTKVPDLTSNNIFSLRDGGSSAGNAA CHHHCCEEEECCCCCHHHEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCC FGTAIEVDGVRIGNNSSFGNMTGIDTRSISVADIESVEVITGVPSAEYGDLNSGMVKIHT CCCEEEECCEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEE KKGKTPWNVLLSINPRTEQVSFSKGLDLGNDKGIVNISGEWIKATQKLNSPYTSYTRRGF CCCCCCEEEEEEECCCCCEEEHHCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHCCC SAGYSNTFRKVLRFDIGLTGNIGGMNTKDDPDAYTGEYTKVRDNVFRANTSLAWLLNKSW CCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEEECCE ITNLKLDASVYYNDNKSHAHTPYSYASEQPAVHAEQEGYFIAGKLPYHFFADQIVDSKEL EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHCCCCCC DYAASLKYEWNRRFKNVTSNLKAGVQWKGTGNVGDGEYYQNPSLAPNGYRPRSYSAYPYM CEEEEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEE HNVSLYAEESLSVAVGSTMLRLMAGLRWENLFISGTQYDKLNTLSPRFNARWQLNENIAI EEEEEEECCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEE RGGWGVTEKLPSYYVLYPRQEYRDIQTFGVSYNNNESAYVYYSQPYTLLHNEKLRWQKNQ EECCCCHHCCCCEEEEECHHHHCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEECCC NAEIGVDINVARTRISLVGYFNRTKMPYKYTSTYTPFAYNVLQLPEGFELSANPQITVDN CCEEEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCEECCCCEEEEEC QTGMGYIRDDEDSYWTPLDVKVKDQTFVRSTSPDNGPDITRRGAEMIIDFPEITPLRTQF CCCCEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHCCCCEEEEECCCCCCCCEEE RVDAAYTYSKYIDNSLSYYYQNGWSHTTLANRSYQYVGIYANGDNSSTTANGKRTHSLDA EEEEEEEEHHHHCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCC NITAITRIPKARLIISCKLEASLIKRSQNLSEYNGTSYAFNVSENSNEKTGGSIYDGNSY CEEEEEECCCEEEEEEEEEHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCCEEECCCCE TAIYPVAYLDLNNEVHPFTAAEAENPDFAHLIRKSGNAYTFAADGYDPYFSANISITKEI EEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEECCEEEEECC GDHVSLSFNAINFTNSRAYVKSYATGTSAIFTPNFYYGLTCRIKL CCEEEEEEEEEEECCCCEEEEEECCCCCEEECCCEEEEEEEEEEC >Mature Secondary Structure MRFLTLKIMLCLLLSLIISRIEANTNNYSISGRISDERTGSPLPGASILIKGTYLWAVSD CEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEC QKGEFTIQGIQEGKYQLEVSFLGYVPATVPVNVNNSIKGLKIQLKENTLALNDVIVTAQA CCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECC PKSELNTTLNIGSNALEHLQISNVSDISALLPGGKTKVPDLTSNNIFSLRDGGSSAGNAA CHHHCCEEEECCCCCHHHEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCC FGTAIEVDGVRIGNNSSFGNMTGIDTRSISVADIESVEVITGVPSAEYGDLNSGMVKIHT CCCEEEECCEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEE KKGKTPWNVLLSINPRTEQVSFSKGLDLGNDKGIVNISGEWIKATQKLNSPYTSYTRRGF CCCCCCEEEEEEECCCCCEEEHHCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHCCC SAGYSNTFRKVLRFDIGLTGNIGGMNTKDDPDAYTGEYTKVRDNVFRANTSLAWLLNKSW CCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEEECCE ITNLKLDASVYYNDNKSHAHTPYSYASEQPAVHAEQEGYFIAGKLPYHFFADQIVDSKEL EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHCCCCCC DYAASLKYEWNRRFKNVTSNLKAGVQWKGTGNVGDGEYYQNPSLAPNGYRPRSYSAYPYM CEEEEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEE HNVSLYAEESLSVAVGSTMLRLMAGLRWENLFISGTQYDKLNTLSPRFNARWQLNENIAI EEEEEEECCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEE RGGWGVTEKLPSYYVLYPRQEYRDIQTFGVSYNNNESAYVYYSQPYTLLHNEKLRWQKNQ EECCCCHHCCCCEEEEECHHHHCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEECCC NAEIGVDINVARTRISLVGYFNRTKMPYKYTSTYTPFAYNVLQLPEGFELSANPQITVDN CCEEEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCEECCCCEEEEEC QTGMGYIRDDEDSYWTPLDVKVKDQTFVRSTSPDNGPDITRRGAEMIIDFPEITPLRTQF CCCCEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHCCCCEEEEECCCCCCCCEEE RVDAAYTYSKYIDNSLSYYYQNGWSHTTLANRSYQYVGIYANGDNSSTTANGKRTHSLDA EEEEEEEEHHHHCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCC NITAITRIPKARLIISCKLEASLIKRSQNLSEYNGTSYAFNVSENSNEKTGGSIYDGNSY CEEEEEECCCEEEEEEEEEHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCCEEECCCCE TAIYPVAYLDLNNEVHPFTAAEAENPDFAHLIRKSGNAYTFAADGYDPYFSANISITKEI EEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEECCEEEEECC GDHVSLSFNAINFTNSRAYVKSYATGTSAIFTPNFYYGLTCRIKL CCEEEEEEEEEEECCCCEEEEEECCCCCEEECCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA