| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349032
Identifier: 29349032
GI number: 29349032
Start: 4696372
End: 4697637
Strand: Reverse
Name: 29349032
Synonym: BT_3624
Alternate gene names: NA
Gene position: 4697637-4696372 (Counterclockwise)
Preceding gene: 29349033
Following gene: 29349031
Centisome position: 75.04
GC content: 42.65
Gene sequence:
>1266_bases ATGAAAATTTGCAAGGCATGTACATTTCTGAGTTTCCTCATTATATTATTATACAGTTGTGCGCTTCCGCCTGAGGATGA AAAAGAGAGCCTTGAACCGGACAGTTCAACATCAGAACTTCCCTGGACAGGAGAAACCGAGAAATTCACGATTAATACCA AAGAAGGCGTACACTTGAATGATCCGCAGGAAGATGCAGGAACAGCATATATCACGATCCCCTCTTCTTCTGTAAGAAGC ACCCGATGGGAATTCGGGGTACGGCTCACCTTTAATCCTTCCGCCAATAATTACGCCCGTTTCTATTTAGCCTCTTCATC GGAAATACTTTCCGGAGATCTGAACGGCTATTACATTCAGATAGGAGGAACAAAAGACAATGTAGCACTTTACCGGCAAA ATGGGAATCAATCCAAATTACTGGCTTCGGGAAGAGAACTCATGAAAGGAAATAATTCTCCGAAATTATTTATCAAAGTA GAATGCGACGCCAACGGCTACTGGACTTTCTGGACACGCATGGAAACGGAAACCGAATATACGAAGGAGAAACAAATAAA AGACGCAAGTATCACAAAGTCAATCTGCTGCGGCATATACTGCGTTTATACAAAAAGCCGCTGTGACGGTTTCACTTTCC ATCATATACAGTTGTCTGATGATGTGATAACAAGTACTGAACCGGACGACATACCGGACGTTCCGGATGAACCGGACAAG CCTGACACACCGGAATCGCCGGAATATCCTGACAATGTGAGAAATATGTTACTATTCAACGAAGTGATGTATGACAATGC CAAAGACGGTGCCGAATACATCGAATTCTATAATCCTGCTGATCAGGATATCACTGTAAAGTCTCTGCGTCTGTTTAAAA TGAGAGCAACGGGAGAAATATTCAGTACCACAATACTCAAACAGGAAGATGAAAATACAAACCTTGTTATTCCCGGCAAA GGATATATTTGTTTTACTCACTCCGCAACTACACTGATCAGAAAGCATAAGGTTGACGGCAAAAGTATAACCGAAATATC CAAATTTCCGCAACTGAGCAACGACGGAGGTTACCTTGCCTTGGCAACTGATGAAGAACATCCCCGCACGATTGATACCT GCCGTTTCATAGACTGGATGCACGACACTTCAGTCACTACAGGCATTTCATTAGAGAAGATATCTCCTGAACTTCCTTCT CTCAACAAAAACTGGCACTCATCGAGAAATGATACAGGTGGCACACCCGGAATAAAAAACTCATAA
Upstream 100 bases:
>100_bases GAAACTGTACCTTTGCAAGCATGAACATTATCCGATCCGCAATTGCCTCTGCGTTGAACACAAACAAATACGGTAGATAA CAACACTAATTTAAAGCCGT
Downstream 100 bases:
>100_bases GAAGGATGCATTTATTTGATAAATTCCCTACATTTGTACAATTTGTAGGAAAAGCATATTTGAATATATTCACCCGCGAA CGAATTTTAAGCAACAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKICKACTFLSFLIILLYSCALPPEDEKESLEPDSSTSELPWTGETEKFTINTKEGVHLNDPQEDAGTAYITIPSSSVRS TRWEFGVRLTFNPSANNYARFYLASSSEILSGDLNGYYIQIGGTKDNVALYRQNGNQSKLLASGRELMKGNNSPKLFIKV ECDANGYWTFWTRMETETEYTKEKQIKDASITKSICCGIYCVYTKSRCDGFTFHHIQLSDDVITSTEPDDIPDVPDEPDK PDTPESPEYPDNVRNMLLFNEVMYDNAKDGAEYIEFYNPADQDITVKSLRLFKMRATGEIFSTTILKQEDENTNLVIPGK GYICFTHSATTLIRKHKVDGKSITEISKFPQLSNDGGYLALATDEEHPRTIDTCRFIDWMHDTSVTTGISLEKISPELPS LNKNWHSSRNDTGGTPGIKNS
Sequences:
>Translated_421_residues MKICKACTFLSFLIILLYSCALPPEDEKESLEPDSSTSELPWTGETEKFTINTKEGVHLNDPQEDAGTAYITIPSSSVRS TRWEFGVRLTFNPSANNYARFYLASSSEILSGDLNGYYIQIGGTKDNVALYRQNGNQSKLLASGRELMKGNNSPKLFIKV ECDANGYWTFWTRMETETEYTKEKQIKDASITKSICCGIYCVYTKSRCDGFTFHHIQLSDDVITSTEPDDIPDVPDEPDK PDTPESPEYPDNVRNMLLFNEVMYDNAKDGAEYIEFYNPADQDITVKSLRLFKMRATGEIFSTTILKQEDENTNLVIPGK GYICFTHSATTLIRKHKVDGKSITEISKFPQLSNDGGYLALATDEEHPRTIDTCRFIDWMHDTSVTTGISLEKISPELPS LNKNWHSSRNDTGGTPGIKNS >Mature_421_residues MKICKACTFLSFLIILLYSCALPPEDEKESLEPDSSTSELPWTGETEKFTINTKEGVHLNDPQEDAGTAYITIPSSSVRS TRWEFGVRLTFNPSANNYARFYLASSSEILSGDLNGYYIQIGGTKDNVALYRQNGNQSKLLASGRELMKGNNSPKLFIKV ECDANGYWTFWTRMETETEYTKEKQIKDASITKSICCGIYCVYTKSRCDGFTFHHIQLSDDVITSTEPDDIPDVPDEPDK PDTPESPEYPDNVRNMLLFNEVMYDNAKDGAEYIEFYNPADQDITVKSLRLFKMRATGEIFSTTILKQEDENTNLVIPGK GYICFTHSATTLIRKHKVDGKSITEISKFPQLSNDGGYLALATDEEHPRTIDTCRFIDWMHDTSVTTGISLEKISPELPS LNKNWHSSRNDTGGTPGIKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47374; Mature: 47374
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKICKACTFLSFLIILLYSCALPPEDEKESLEPDSSTSELPWTGETEKFTINTKEGVHLN CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCEECC DPQEDAGTAYITIPSSSVRSTRWEFGVRLTFNPSANNYARFYLASSSEILSGDLNGYYIQ CCCHHHCEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEECCCCEEEEE IGGTKDNVALYRQNGNQSKLLASGRELMKGNNSPKLFIKVECDANGYWTFWTRMETETEY ECCCCCCEEEEEECCCCHHHHHHCHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCHHH TKEKQIKDASITKSICCGIYCVYTKSRCDGFTFHHIQLSDDVITSTEPDDIPDVPDEPDK HHHHHCCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCC PDTPESPEYPDNVRNMLLFNEVMYDNAKDGAEYIEFYNPADQDITVKSLRLFKMRATGEI CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEHEEEEEEECCCCC FSTTILKQEDENTNLVIPGKGYICFTHSATTLIRKHKVDGKSITEISKFPQLSNDGGYLA CEEEEEECCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEE LATDEEHPRTIDTCRFIDWMHDTSVTTGISLEKISPELPSLNKNWHSSRNDTGGTPGIKN EECCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC S C >Mature Secondary Structure MKICKACTFLSFLIILLYSCALPPEDEKESLEPDSSTSELPWTGETEKFTINTKEGVHLN CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCEECC DPQEDAGTAYITIPSSSVRSTRWEFGVRLTFNPSANNYARFYLASSSEILSGDLNGYYIQ CCCHHHCEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEECCCCEEEEE IGGTKDNVALYRQNGNQSKLLASGRELMKGNNSPKLFIKVECDANGYWTFWTRMETETEY ECCCCCCEEEEEECCCCHHHHHHCHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCHHH TKEKQIKDASITKSICCGIYCVYTKSRCDGFTFHHIQLSDDVITSTEPDDIPDVPDEPDK HHHHHCCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCC PDTPESPEYPDNVRNMLLFNEVMYDNAKDGAEYIEFYNPADQDITVKSLRLFKMRATGEI CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEHEEEEEEECCCCC FSTTILKQEDENTNLVIPGKGYICFTHSATTLIRKHKVDGKSITEISKFPQLSNDGGYLA CEEEEEECCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEE LATDEEHPRTIDTCRFIDWMHDTSVTTGISLEKISPELPSLNKNWHSSRNDTGGTPGIKN EECCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA