| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is sglT [H]
Identifier: 29349031
GI number: 29349031
Start: 4694785
End: 4696272
Strand: Reverse
Name: sglT [H]
Synonym: BT_3623
Alternate gene names: 29349031
Gene position: 4696272-4694785 (Counterclockwise)
Preceding gene: 29349032
Following gene: 29349030
Centisome position: 75.02
GC content: 43.28
Gene sequence:
>1488_bases ATGAGTCCAATTATCTTATCTATTACTATCATAGCATACTTTATGATCCTTTTCGCTATCTCCTATATAGCAGGACATAA AGCGGATAACGAAGGCTTCTTCGTCGGCAACCGCAAATCGGCATGGTATATTGTCGCCTTTGCCATGATTGGTTCCACTA TCTCCGGAGTTACGTTTGTATCCGTACCGGGTATGGTACAAGCCAGCGGCTTCTCCTACCTGCAAATGGTACTGGGATTT ATCGTCGGACAGTTCATTATCGCATTCATACTCGTTCCGCTTTTCTACCGGATGAATCTGGTTTCTATCTATGAATATCT TGAAAATCGCTTCGGAGCTTCTTCCTATAAGACAGGAGCCTGGTTTTTCTTTATTTCCAAAATGCTCGGAGCTGCCGTGC GGCTCTTTTTAGTATGTCTGACCTTGCAATTACTCATCTTCGAGCCTTTCCATATTCCCTTTATAATCAATGTCATACTG ACAGTACTCATTGTCTGGCTCTATACTTTCCGGGGAGGAGTGAAATCATTGATATGGACTGATGTACTGAAAACATTCTG TCTGGTAGTCTCCGTCGTACTTTGTATCTACTATATAGCTTCCAGCCTGCATCTGAATTTCAGCGGATTGGTCTCAACGA TTTCAGACAACGATCTCTCCAAAATGTTCTTTTTTGACGATGTCAACGACAAGCGATATTTCTTCAAGCAATTCCTGGCA GGAGTCTTTACCGTTATCGCCATGAACGGGCTGGATCAGGATATGATGCAACGGAATCTCAGTTGCAAGAACTTCCGTGA CTCACAGAAGAATATGATTACAAGCGGGATTTCACAGTTCTTTGTGATCCTGCTCTTCCTGATGCTGGGTGTCTTGCTCT ATACTTTCACCGCCCGACAGGGAATCGAGAATCCCGGTAAGAGCGATGAATTGTTCCCAATGATCGCCACAGGCAATTAC TTTCCGGGAATAGTCGGTATCCTGTTCATTATCGGATTGATAGCTTCGGCGTACTCCGCTGCCGGATCGGCCTTGACAGC CCTGACGACTTCTTTCACCGTAGATATTCTGAATGCGCACAAGAAAGACGAAGCGGCACTCAGCAAAATACGGAAACACG TGCACATCGGGATGGCATTCGTGATGGGAATCGTCATCTTCGTATTCAATTTACTGAATAATACGAGTGTGATTGATGCG ATTTATACGCTGGCCAGTTATACGTATGGTCCAATTCTCGGACTATTCGCTTTCGGCATTTTTACTAAAAAACAAGTTTA TGATCCATATATTCCGTTAGTAGCCATTCTTTCTCCTGCACTTTGCTACGTATTGCAAAGAAATTCGGAAGCCTGGTTCG ATGGATATCAAATTAGCTACGAGTTACTGATATTGAATGCTGCGTTTACTTTTCTGGGGCTTTGCCTGCTCATCAAAAGG AAATCGTCAGTAGCCCCTATCAACAACTCTTTAATAAAAAAACATTAA
Upstream 100 bases:
>100_bases AGAAGGATGCATTTATTTGATAAATTCCCTACATTTGTACAATTTGTAGGAAAAGCATATTTGAATATATTCACCCGCGA ACGAATTTTAAGCAACAGAT
Downstream 100 bases:
>100_bases AATGAAAAAGAAAATCAATTGCTTCATACCTTTTGGCAATCCGAAAGATACGATACAAACTGTAAAAGAATTGCAAGCTT CAGAATTAGTGAACAAAATC
Product: sodium/iodide co-transporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSPIILSITIIAYFMILFAISYIAGHKADNEGFFVGNRKSAWYIVAFAMIGSTISGVTFVSVPGMVQASGFSYLQMVLGF IVGQFIIAFILVPLFYRMNLVSIYEYLENRFGASSYKTGAWFFFISKMLGAAVRLFLVCLTLQLLIFEPFHIPFIINVIL TVLIVWLYTFRGGVKSLIWTDVLKTFCLVVSVVLCIYYIASSLHLNFSGLVSTISDNDLSKMFFFDDVNDKRYFFKQFLA GVFTVIAMNGLDQDMMQRNLSCKNFRDSQKNMITSGISQFFVILLFLMLGVLLYTFTARQGIENPGKSDELFPMIATGNY FPGIVGILFIIGLIASAYSAAGSALTALTTSFTVDILNAHKKDEAALSKIRKHVHIGMAFVMGIVIFVFNLLNNTSVIDA IYTLASYTYGPILGLFAFGIFTKKQVYDPYIPLVAILSPALCYVLQRNSEAWFDGYQISYELLILNAAFTFLGLCLLIKR KSSVAPINNSLIKKH
Sequences:
>Translated_495_residues MSPIILSITIIAYFMILFAISYIAGHKADNEGFFVGNRKSAWYIVAFAMIGSTISGVTFVSVPGMVQASGFSYLQMVLGF IVGQFIIAFILVPLFYRMNLVSIYEYLENRFGASSYKTGAWFFFISKMLGAAVRLFLVCLTLQLLIFEPFHIPFIINVIL TVLIVWLYTFRGGVKSLIWTDVLKTFCLVVSVVLCIYYIASSLHLNFSGLVSTISDNDLSKMFFFDDVNDKRYFFKQFLA GVFTVIAMNGLDQDMMQRNLSCKNFRDSQKNMITSGISQFFVILLFLMLGVLLYTFTARQGIENPGKSDELFPMIATGNY FPGIVGILFIIGLIASAYSAAGSALTALTTSFTVDILNAHKKDEAALSKIRKHVHIGMAFVMGIVIFVFNLLNNTSVIDA IYTLASYTYGPILGLFAFGIFTKKQVYDPYIPLVAILSPALCYVLQRNSEAWFDGYQISYELLILNAAFTFLGLCLLIKR KSSVAPINNSLIKKH >Mature_494_residues SPIILSITIIAYFMILFAISYIAGHKADNEGFFVGNRKSAWYIVAFAMIGSTISGVTFVSVPGMVQASGFSYLQMVLGFI VGQFIIAFILVPLFYRMNLVSIYEYLENRFGASSYKTGAWFFFISKMLGAAVRLFLVCLTLQLLIFEPFHIPFIINVILT VLIVWLYTFRGGVKSLIWTDVLKTFCLVVSVVLCIYYIASSLHLNFSGLVSTISDNDLSKMFFFDDVNDKRYFFKQFLAG VFTVIAMNGLDQDMMQRNLSCKNFRDSQKNMITSGISQFFVILLFLMLGVLLYTFTARQGIENPGKSDELFPMIATGNYF PGIVGILFIIGLIASAYSAAGSALTALTTSFTVDILNAHKKDEAALSKIRKHVHIGMAFVMGIVIFVFNLLNNTSVIDAI YTLASYTYGPILGLFAFGIFTKKQVYDPYIPLVAILSPALCYVLQRNSEAWFDGYQISYELLILNAAFTFLGLCLLIKRK SSVAPINNSLIKKH
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=412, Percent_Identity=23.7864077669903, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI157671931, Length=410, Percent_Identity=23.4146341463415, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI167466278, Length=421, Percent_Identity=24.7030878859857, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI256985183, Length=404, Percent_Identity=25.4950495049505, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI110835708, Length=467, Percent_Identity=21.1991434689507, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI14140236, Length=454, Percent_Identity=20.9251101321586, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI17941285, Length=452, Percent_Identity=19.9115044247788, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4507031, Length=461, Percent_Identity=21.2581344902386, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32566512, Length=355, Percent_Identity=22.5352112676056, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640370, Length=400, Percent_Identity=25.25, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24651739, Length=456, Percent_Identity=23.6842105263158, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI221459584, Length=455, Percent_Identity=25.0549450549451, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24645928, Length=401, Percent_Identity=24.1895261845387, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281362918, Length=411, Percent_Identity=24.0875912408759, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573698, Length=423, Percent_Identity=22.9314420803783, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24650192, Length=407, Percent_Identity=24.0786240786241, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24651741, Length=413, Percent_Identity=21.7917675544794, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI221459588, Length=413, Percent_Identity=23.728813559322, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI221459586, Length=406, Percent_Identity=23.1527093596059, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641117, Length=271, Percent_Identity=22.5092250922509, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI28574994, Length=433, Percent_Identity=24.4803695150115, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI221459582, Length=401, Percent_Identity=24.4389027431421, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI281362054, Length=375, Percent_Identity=23.2, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362052, Length=375, Percent_Identity=23.2, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362050, Length=375, Percent_Identity=23.2, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648056, Length=375, Percent_Identity=23.2, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356827, Length=375, Percent_Identity=23.2, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI19920916, Length=403, Percent_Identity=22.5806451612903, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI281364280, Length=413, Percent_Identity=23.2445520581114, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221379702, Length=380, Percent_Identity=22.6315789473684, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 55323; Mature: 55192
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIILSITIIAYFMILFAISYIAGHKADNEGFFVGNRKSAWYIVAFAMIGSTISGVTFV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCHHCCCEEE SVPGMVQASGFSYLQMVLGFIVGQFIIAFILVPLFYRMNLVSIYEYLENRFGASSYKTGA ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH WFFFISKMLGAAVRLFLVCLTLQLLIFEPFHIPFIINVILTVLIVWLYTFRGGVKSLIWT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLKTFCLVVSVVLCIYYIASSLHLNFSGLVSTISDNDLSKMFFFDDVNDKRYFFKQFLA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHH GVFTVIAMNGLDQDMMQRNLSCKNFRDSQKNMITSGISQFFVILLFLMLGVLLYTFTARQ HHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIENPGKSDELFPMIATGNYFPGIVGILFIIGLIASAYSAAGSALTALTTSFTVDILNAH CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC KKDEAALSKIRKHVHIGMAFVMGIVIFVFNLLNNTSVIDAIYTLASYTYGPILGLFAFGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FTKKQVYDPYIPLVAILSPALCYVLQRNSEAWFDGYQISYELLILNAAFTFLGLCLLIKR HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHC KSSVAPINNSLIKKH CCCCCCCCCHHHCCC >Mature Secondary Structure SPIILSITIIAYFMILFAISYIAGHKADNEGFFVGNRKSAWYIVAFAMIGSTISGVTFV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCHHCCCEEE SVPGMVQASGFSYLQMVLGFIVGQFIIAFILVPLFYRMNLVSIYEYLENRFGASSYKTGA ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH WFFFISKMLGAAVRLFLVCLTLQLLIFEPFHIPFIINVILTVLIVWLYTFRGGVKSLIWT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLKTFCLVVSVVLCIYYIASSLHLNFSGLVSTISDNDLSKMFFFDDVNDKRYFFKQFLA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHH GVFTVIAMNGLDQDMMQRNLSCKNFRDSQKNMITSGISQFFVILLFLMLGVLLYTFTARQ HHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIENPGKSDELFPMIATGNYFPGIVGILFIIGLIASAYSAAGSALTALTTSFTVDILNAH CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC KKDEAALSKIRKHVHIGMAFVMGIVIFVFNLLNNTSVIDAIYTLASYTYGPILGLFAFGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FTKKQVYDPYIPLVAILSPALCYVLQRNSEAWFDGYQISYELLILNAAFTFLGLCLLIKR HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHC KSSVAPINNSLIKKH CCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]