Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29349027

Identifier: 29349027

GI number: 29349027

Start: 4688463

End: 4689581

Strand: Reverse

Name: 29349027

Synonym: BT_3619

Alternate gene names: NA

Gene position: 4689581-4688463 (Counterclockwise)

Preceding gene: 29349028

Following gene: 29349026

Centisome position: 74.91

GC content: 43.07

Gene sequence:

>1119_bases
ATGAATGTAACAACAAGTAACAAACGCCTATTGGCACTCGATGTGATGCGGGGCATCACCATCGCGGGTATGATCTTAGT
AAATACGCCCGGTTCCTGGCAACATGCGTATGCTCCCCTCAAACATGCCGAGTGGATTGGATTAACTCCTACCGATCTGG
TATTCCCATTCTTTATGTTCATTATGGGAATCTCCACGTACATCTCTTTGAGAAAGTACAATTTCACCTTCAGTGTTCCC
GCGGGTTTAAAAATTCTCAAACGGACCGTGATCATTTTCCTGATTGGAATTGGCATCAGCTGGCTTTCCATTCTCTGCTT
CCAGCACGATCCCTTCCCTATCGACCAGATTCGCATTCTCGGAGTCATGCAACGGCTTGCTTTGGGATATGGAGTTACTG
CCATAGTCGCTTTACTCATGAAGCATAAATATATACCTTATTTAATTGCTGTACTTCTCATTAGTTATTTTGCAATCCTT
GCCCTCGGCAATGGATATGTCTACGACGAAACAAATATTCTTTCCATCGTCGACCGTGCAGTATTAGGACAAGCTCATAT
CTATGGCGGTCAGATACTTGATCCGGAAGGACTGCTTAGTACTATTTCAGCCATCGCCCACGTCTTAATCGGCTTCTGTG
CCGGAAAGCTATTGATGGAAGTAAAAGATATTCATGAGAAGCTGGAACGTTTGTTCCTGATAGGTACTATCCTTACTTTC
GCAGGTTTCTTACTGAGTTATGGTTCCCCTATCTGCAAGAAAGTATGGTCTCCTTCCTTCGTACTCGTAACCTGCGGTCT
GGGTTCCAGTTTTCTGGCATTACTCGTATGGATCATTGACATTAAAGGTTATAAAAACTGGAGCCGTTTCTTCGAATCGT
TTGGAGTAAATCCGCTATTTATTTATGTATTGGCAGATATTCTGGCGATTACGCTGGCAGTCATTCCTATGACCTACCAA
GGTGAAGCGACTTCTTTACATGGCTATATTTACAGCGCACTCCTACAACCTGTCTTCGGAGATAAAGGAGGCTCGCTTGT
ATTTGCCCTGCTTTTTGTCCTTCTCAACTGGGCAATAGGCTACATTCTATATAAAAAGAAAATATACATTAAGATATGA

Upstream 100 bases:

>100_bases
CCTTGCTTCATGGATGATCCGCAATCGACTGGACAGTTCCTTCGGAAAAAAGAGATAAAATTGAATTACTTATAACTTAA
CACATTAAAAAGTAACAGTC

Downstream 100 bases:

>100_bases
TACTCATTGCAGACAGTGGTTCTACCAAAACAGACTGGTGTGTCGTACTGAACGGCGCAGTTATCAAGCGACTTGGAACG
AAAGGGATCAACCCTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP
AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL
ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF
AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ
GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI

Sequences:

>Translated_372_residues
MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP
AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL
ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF
AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ
GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI
>Mature_372_residues
MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMFIMGISTYISLRKYNFTFSVP
AGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRILGVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAIL
ALGNGYVYDETNILSIVDRAVLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF
AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLFIYVLADILAITLAVIPMTYQ
GEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIGYILYKKKIYIKI

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI150378452, Length=432, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24639786, Length=362, Percent_Identity=30.3867403314917, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41366; Mature: 41366

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMF
CCCCCCCCEEEHHHHHHCHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
IMGISTYISLRKYNFTFSVPAGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRIL
HHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
GVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAILALGNGYVYDETNILSIVDRA
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
VLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF
HHCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLF
HHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
IYVLADILAITLAVIPMTYQGEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YILYKKKIYIKI
HHHEEEEEEEEC
>Mature Secondary Structure
MNVTTSNKRLLALDVMRGITIAGMILVNTPGSWQHAYAPLKHAEWIGLTPTDLVFPFFMF
CCCCCCCCEEEHHHHHHCHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
IMGISTYISLRKYNFTFSVPAGLKILKRTVIIFLIGIGISWLSILCFQHDPFPIDQIRIL
HHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
GVMQRLALGYGVTAIVALLMKHKYIPYLIAVLLISYFAILALGNGYVYDETNILSIVDRA
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
VLGQAHIYGGQILDPEGLLSTISAIAHVLIGFCAGKLLMEVKDIHEKLERLFLIGTILTF
HHCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFLLSYGSPICKKVWSPSFVLVTCGLGSSFLALLVWIIDIKGYKNWSRFFESFGVNPLF
HHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
IYVLADILAITLAVIPMTYQGEATSLHGYIYSALLQPVFGDKGGSLVFALLFVLLNWAIG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YILYKKKIYIKI
HHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA